RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 RPP14O95059 124 aaKnown RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 UBL3O95164 117 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 IGLV1-44P01699 117 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SERPINA5P05154 406 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CECR9P0C854 216 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SLC2A1P11166 492 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CBR1P16152 277 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 MYL12AP19105 171 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 WNT5AP41221 380 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 HTR5AP47898 357 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 PRKXP51817 358 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CAV3P56539 151 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 WNT4P56705 351 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 BPIFB3P59826 476 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 PCBD1P61457 104 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 RPS25P62851 125 aaKnown RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 GALK2Q01415 458 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 RAB35Q15286 201 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SPHARQ15513 63 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 KCTD18Q6PI47 426 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CLEC18BQ6UXF7 455 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 RHOUQ7L0Q8 258 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 KLBQ86Z14 1044 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF101Q8IZC7 436 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SYS1Q8N2H4 156 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 PRSS35Q8N3Z0 413 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CLEC18CQ8NCF0 446 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 STEAP2Q8NFT2 490 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 OR52N1Q8NH53 320 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 OR1F12Q8NHA8 337 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ASB17Q8WXJ9 295 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ZC3HAV1LQ96H79 300 aaKnown RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 POM121L2Q96KW2 1035 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 OR14A2Q96R54 314 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 MROQ9BYG7 248 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SLIRPQ9GZT3 109 aaKnown RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 HDHD2Q9H0R4 259 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 DCSTAMPQ9H295 470 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 RNF121Q9H920 327 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CRNNQ9UBG3 495 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 GNG8Q9UK08 70 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 IKZF2Q9UKS7 526 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ERGIC3Q9Y282 383 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CAB39Q9Y376 341 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 HIVEP3Q5T1R4 2406 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 FAM208BQ5VWN6 2430 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM269A0A1B0GVZ9 245 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 C5orf49A4QMS7 147 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 METTL15A6NJ78 407 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 M0R135 149 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 PHYHO14832 338 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 MYL12BO14950 172 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 MRPS14O60783 128 aaKnown RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 MTRF1O75570 445 aaKnown RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SULT1C4O75897 302 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 UBR5O95071 2799 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 NGFP01138 241 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 KRT8P05787 483 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 H2BFMP0C1H6 154 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ACSM4P0C7M7 580 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 TNFRSF1AP19438 455 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 STOMP27105 288 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CALCRP30988 508 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ARR3P36575 388 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CRYBB2P43320 205 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 KIR3DL2P43630 455 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SERPINB10P48595 397 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF83P51522 516 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF121P58317 390 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ACTA2P62736 377 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ACTG2P63267 376 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 IFITM3Q01628 133 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 MXD1Q05195 221 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SPOCK1Q08629 439 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 FOXL1Q12952 345 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 PPA1Q15181 289 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SNAI3Q3KNW1 292 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 DEGS2Q6QHC5 323 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF367Q7RTV3 350 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 CCDC36Q8IYA8 594 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 RDH10Q8IZV5 341 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 YIPF7Q8N8F6 280 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SLC30A7Q8NEW0 376 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF799Q96GE5 643 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 KCNS3Q9BQ31 491 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 WACQ9BTA9 647 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 MND1Q9BWT6 205 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SSBP3Q9BWW4 388 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 BARHL1Q9BZE3 327 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 KCNN2Q9H2S1 579 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 TPK1Q9H3S4 243 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 EXOSC4Q9NPD3 245 aaKnown RBP4.07□□□□□ -1.76
SF3B1-208ENST00000470268 OBP2BQ9NPH6 170 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 G6PC2Q9NQR9 355 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 FAM206AQ9NX38 181 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 BABAM2Q9NXR7 383 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 ST6GALNAC2Q9UJ37 374 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 SLC22A13Q9Y226 551 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 AMDHD2Q9Y303 409 aa4.07□□□□□ -1.76
SF3B1-208ENST00000470268 DPRXA6NFQ7 191 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms