RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 CD200P41217 278 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 CCR9P51686 369 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 GBX2P52951 348 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-204ENST00000469054 TMEM33P57088 247 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 RIPPLY1Q0D2K3 151 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 MAB21L1Q13394 359 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 RIN1Q13671 783 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 ALKBH1Q13686 389 aaKnown RBP10.12□□□□□ -0.79
VPS13D-204ENST00000469054 OR8G1Q15617 311 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 ODF4Q2M2E3 257 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 HFEQ30201 348 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 OR2G6Q5TZ20 316 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 Q6ZSR3 168 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 DOK3Q7L591 496 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 KRT74Q7RTS7 529 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 KLHL36Q8N4N3 616 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 CELF2-AS1Q8N7Q2 184 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 CCL17Q92583 94 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 PIMREGQ9BSJ6 248 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 ADAT1Q9BUB4 502 aaKnown RBP10.12□□□□□ -0.79
VPS13D-204ENST00000469054 PAPOLGQ9BWT3 736 aaKnown RBP10.12□□□□□ -0.79
VPS13D-204ENST00000469054 REG4Q9BYZ8 158 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 Q9H521 79 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 ZNF275Q9NSD4 429 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-204ENST00000469054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.11□□□□□ -0.79
VPS13D-204ENST00000469054 ZNF816-ZNF321PA0A0X1KG74 233 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 A0A1B0GVI7 797 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 VWC2LB2RUY7 222 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 E9PI62 339 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 H7C1Q1 480 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 SYT7O43581 403 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 DENRO43583 198 aaKnown RBP10.11□□□□□ -0.79
VPS13D-204ENST00000469054 ISG15P05161 165 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 CDK1P06493 297 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 UBCP0CG48 685 aaKnown RBP10.11□□□□□ -0.79
VPS13D-204ENST00000469054 CD99P14209 185 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 GNALP38405 381 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 KIR3DL2P43630 455 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 TGM4P49221 684 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 MZT1Q08AG7 82 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 ZBTB37Q5TC79 503 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 TMEM244Q5VVB8 128 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 RDH10Q8IZV5 341 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 CCDC54Q8NEL0 328 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 OR14K1Q8NGZ2 314 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 OR8S1Q8NH09 359 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 OR52N1Q8NH53 320 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 PIGCQ92535 297 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 DVL3Q92997 716 aaPredicted RBP10.11□□□□□ -0.79
VPS13D-204ENST00000469054 MYDGFQ969H8 173 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 TMUB1Q9BVT8 246 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 BPESC1Q9GZL8 116 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 PPP1R3EQ9H7J1 279 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 GCM1Q9NP62 436 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 TREM2Q9NZC2 230 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 ENPP5Q9UJA9 477 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 PIGLQ9Y2B2 252 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 TPRKBQ9Y3C4 175 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 MPC1Q9Y5U8 109 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 CACNG2Q9Y698 323 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 V9GYS6 101 aa10.11□□□□□ -0.79
VPS13D-204ENST00000469054 IGHV3-64DA0A0J9YX35 117 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 ANXA2P2A6NMY6 339 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 OR4C45A6NMZ5 311 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 DHRS7CA6NNS2 312 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 ZNF850A8MQ14 1090 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 H3BSH0 61 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 PTBP3O95758 552 aaKnown RBP10.1□□□□□ -0.79
VPS13D-204ENST00000469054 CRHBPP24387 322 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 NR4A2P43354 598 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 GATA4P43694 442 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 GPR6P46095 362 aaPredicted RBP10.1□□□□□ -0.79
VPS13D-204ENST00000469054 GTF2A1P52655 376 aaPredicted RBP10.1□□□□□ -0.79
VPS13D-204ENST00000469054 SLC35A2P78381 396 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 SLC3A1Q07837 685 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 PRDX4Q13162 271 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 CCDC58Q4VC31 144 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 RNLSQ5VYX0 342 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 CIARTQ8N365 385 aaPredicted RBP10.1□□□□□ -0.79
VPS13D-204ENST00000469054 GATAD2BQ8WXI9 593 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 ERGIC1Q969X5 290 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 ITPKCQ96DU7 683 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 DUSP21Q9H596 190 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 ABCB9Q9NP78 766 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 TMEM106BQ9NUM4 274 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 BABAM2Q9NXR7 383 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 PPP1R3CQ9UQK1 317 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 PCDHGB5Q9Y5G0 923 aa10.1□□□□□ -0.79
VPS13D-204ENST00000469054 A0A096LNT2 108 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 LOC100289279A0A1B0GTE1 492 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 LOC107986453A0A1B0GWG9 222 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 TMEM212A6NML5 194 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 CLDN25C9JDP6 229 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 MYL12BO14950 172 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 PPIHO43447 177 aaKnown RBP10.09□□□□□ -0.79
VPS13D-204ENST00000469054 RPSAP08865 295 aaKnown RBP10.09□□□□□ -0.79
VPS13D-204ENST00000469054 FAHP16930 419 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 ZNF12P17014 697 aa10.09□□□□□ -0.79
VPS13D-204ENST00000469054 PMELP40967 661 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms