RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 STEAP2Q8NFT2 490 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 OR56B1Q8NGI3 324 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ABHD3Q8WU67 409 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 GCDHQ92947 438 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 MRPS24Q96EL2 167 aaKnown RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 BOD1Q96IK1 185 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF845Q96IR2 970 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 FAM71F1Q96KD3 344 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 PRRT1Q99946 306 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 OCSTAMPQ9BR26 566 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 LPAR5Q9H1C0 372 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 WNT5BQ9H1J7 359 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 TP63Q9H3D4 680 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 OPA3Q9H6K4 179 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 PLA2G3Q9NZ20 509 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 SCP2D1Q9UJQ7 156 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 MRPS28Q9Y2Q9 187 aaKnown RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 MED13Q9UHV7 2174 aa6.65□□□□□ -1.35
COL6A3-208ENST00000468792 EP300Q09472 2414 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 TRGV5A0A0B4J1U4 118 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 WIPF3A6NGB9 483 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CEACAM18A8MTB9 384 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF736B4DX44 427 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 PRSS44E7EML9 344 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 J3QW42 95 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 AKR7A2O43488 359 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CREBL2O60519 120 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CDC14BO60729 498 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 OR2A4O95047 310 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CNOT4O95628 575 aaKnown RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 RAB3DO95716 219 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CD3DP04234 171 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 SERPINA5P05154 406 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 HCKP08631 526 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CELA3AP09093 270 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF735P0CB33 412 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ARR3P36575 388 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 PMELP40967 661 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 VEGFCP49767 419 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 RPS27AP62979 156 aaKnown RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ARG2P78540 354 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 MRPS15P82914 257 aaKnown RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 IFITM2Q01629 132 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 IKZF1Q13422 519 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 GK2Q14410 553 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CNN3Q15417 329 aaKnown RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 MPPED2Q15777 294 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 UBE2V2Q15819 145 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 GFOD2Q3B7J2 385 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CDNFQ49AH0 187 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 RNASE12Q5GAN4 147 aaKnown RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 NSUN5P2Q63ZY6 315 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF774Q6NX45 483 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 FAHD2BQ6P2I3 314 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF782Q6ZMW2 699 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 Q6ZTK2 550 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 NCCRP1Q6ZVX7 275 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 COMMD2Q86X83 199 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF584Q8IVC4 421 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CCDC36Q8IYA8 594 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ZDHHC22Q8N966 263 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 OR11H7Q8NGC8 314 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 CCDC107Q8WV48 283 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 APH1AQ96BI3 265 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 FAHD2AQ96GK7 314 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 WDYHV1Q96HA8 205 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 REEP6Q96HR9 211 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 ALKBH3Q96Q83 286 aaPredicted RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 OR2A7Q96R45 310 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 SOX7Q9BT81 388 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 TMEM59Q9BXS4 323 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 HES7Q9BYE0 225 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 SLC6A15Q9H2J7 730 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 PCDHB16Q9NRJ7 776 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 SLC7A10Q9NS82 523 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 IL36GQ9NZH8 169 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 MRPL15Q9P015 296 aaKnown RBP6.64□□□□□ -1.35
COL6A3-208ENST00000468792 PIGLQ9Y2B2 252 aa6.64□□□□□ -1.35
COL6A3-208ENST00000468792 TRAV17A0A0B4J275 112 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 hCG_38984A0A1B0GV85 526 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 SPAARA0A1B0GVQ0 90 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 OR14I1A6ND48 311 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ARGFXA6NJG6 315 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF891A8MT65 544 aaPredicted RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 FAM166BA8MTA8 275 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 SERPINE3A8MV23 424 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 DISC1C4P0D8 188 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PYCARD-AS1I3L0S3 204 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 MFNGO00587 321 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ARPC1BO15143 372 aaKnown RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 TPD52L2O43399 206 aaKnown RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 SS18L1O75177 396 aaPredicted RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 RGS11O94810 467 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 F10P00742 488 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 HPXP02790 462 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 DBHP09172 617 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 GIPP09681 153 aaPredicted RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PTHLHP12272 177 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 B4GALT1P15291 398 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 HIST1H1DP16402 221 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms