RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 TMEM33P57088 247 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 MRPS11P82912 194 aaKnown RBP11.76□□□□□ -0.53
UBA3-209ENST00000466763 MVKQ03426 396 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 RIPPLY1Q0D2K3 151 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
UBA3-209ENST00000466763 PRDX4Q13162 271 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 OR8B8Q15620 311 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 AVPI1Q5T686 147 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 PRAMEF6Q5VXH4 476 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 KCTD8Q6ZWB6 473 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 MOGAT3Q86VF5 341 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 SYS1Q8N2H4 156 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 PRSS35Q8N3Z0 413 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 KLHL36Q8N4N3 616 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 SPERTQ8NA61 448 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 OR2G2Q8NGZ5 317 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 ZNF420Q8TAQ5 688 aaPredicted RBP11.76□□□□□ -0.53
UBA3-209ENST00000466763 HIST1H2AAQ96QV6 131 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 TMUB1Q9BVT8 246 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 ANKRD60Q9BZ19 345 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 PPP1R3EQ9H7J1 279 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 PLCXD1Q9NUJ7 323 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 UFSP2Q9NUQ7 469 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 PSORS1C1Q9UIG5 152 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 RAB26Q9ULW5 256 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 DIMT1Q9UNQ2 313 aaKnown RBP11.76□□□□□ -0.53
UBA3-209ENST00000466763 PIGLQ9Y2B2 252 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 ACANP16112 2415 aa11.76□□□□□ -0.53
UBA3-209ENST00000466763 ZNF816-ZNF321PA0A0X1KG74 233 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 A0A1B0GTI1 187 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 ISPDA4D126 451 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 A6NIN4 97 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 A6NLC8 198 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 CLDN25C9JDP6 229 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 SYT7O43581 403 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 RP2O75695 350 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 DHRS3O75911 302 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 INHBBP09529 407 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 PIPP12273 146 aaPredicted RBP11.75□□□□□ -0.53
UBA3-209ENST00000466763 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 FAHP16930 419 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 USF1P22415 310 aaPredicted RBP11.75□□□□□ -0.53
UBA3-209ENST00000466763 GIFP27352 417 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 KIR3DL2P43630 455 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 CSNK2BP67870 215 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 SLC3A1Q07837 685 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 MAB21L1Q13394 359 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 RIN1Q13671 783 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 OR2G6Q5TZ20 316 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 DOK3Q7L591 496 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 PEG10Q86TG7 708 aaKnown RBP11.75□□□□□ -0.53
UBA3-209ENST00000466763 RDH10Q8IZV5 341 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 ZNF676Q8N7Q3 588 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 RAB1CQ92928 201 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 MICU1Q9BPX6 476 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 ZNF649Q9BS31 505 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 Q9H521 79 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 PLEKHA1Q9HB21 404 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 C14orf119Q9NWQ9 140 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 DCAF16Q9NXF7 216 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 CNOT2Q9NZN8 540 aaKnown RBP11.75□□□□□ -0.53
UBA3-209ENST00000466763 FRRS1LQ9P0K9 344 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 CLEC2DQ9UHP7 191 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 CAB39Q9Y376 341 aaPredicted RBP11.75□□□□□ -0.53
UBA3-209ENST00000466763 MPC1Q9Y5U8 109 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 OTOGQ6ZRI0 2925 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 AKAP9Q99996 3911 aa11.75□□□□□ -0.53
UBA3-209ENST00000466763 LOC107986453A0A1B0GWG9 222 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 E9PI62 339 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 SLC1A7O00341 560 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 UBCP0CG48 685 aaKnown RBP11.74□□□□□ -0.53
UBA3-209ENST00000466763 IRF2P14316 349 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 CD200P41217 278 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 NANOS3P60323 173 aaKnown RBP11.74□□□□□ -0.53
UBA3-209ENST00000466763 ALKBH1Q13686 389 aaKnown RBP11.74□□□□□ -0.53
UBA3-209ENST00000466763 DMRTC1Q5HYR2 192 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 CEP78Q5JTW2 689 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 KLBQ86Z14 1044 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
UBA3-209ENST00000466763 OR11L1Q8NGX0 322 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 GATAD2BQ8WXI9 593 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 MYDGFQ969H8 173 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 RNF170Q96K19 258 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 COX4I2Q96KJ9 171 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 ZNF184Q99676 751 aaPredicted RBP11.74□□□□□ -0.53
UBA3-209ENST00000466763 JAM3Q9BX67 310 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 GCM1Q9NP62 436 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 ENPP5Q9UJA9 477 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 TPRKBQ9Y3C4 175 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 CR1P17927 2039 aa11.74□□□□□ -0.53
UBA3-209ENST00000466763 FLNAP21333 2647 aaKnown RBP11.73□□□□□ -0.53
UBA3-209ENST00000466763 IGHV4-61A0A0C4DH41 118 aa11.73□□□□□ -0.53
UBA3-209ENST00000466763 TRBV2A0A0J9YWF9 115 aa11.73□□□□□ -0.53
UBA3-209ENST00000466763 LOC100289279A0A1B0GTE1 492 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms