RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 OR12D2P58182 307 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 TIGD6Q17RP2 521 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 TP53I3Q53FA7 332 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 FAM220AQ7Z4H9 259 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 CLDND2Q8NHS1 167 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 HPS1Q92902 700 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 SPSB4Q96A44 273 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 TIMD4Q96H15 378 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 REEP6Q96HR9 211 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 PGAM5Q96HS1 289 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 OR10A2Q9H208 303 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 RGCCQ9H4X1 137 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 OPA3Q9H6K4 179 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 MOB1AQ9H8S9 216 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 ZNF391Q9UJN7 358 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 GNG8Q9UK08 70 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 BLOC1S6Q9UL45 172 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 CAB39Q9Y376 341 aaPredicted RBP14.4□□□□□ -0.1
VPS52-215ENST00000464425 WIPI2Q9Y4P8 454 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 SNX5Q9Y5X3 404 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 R4GMQ9 66 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 NF1P21359 2839 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 A8MV72 311 aaPredicted RBP14.39□□□□□ -0.11
VPS52-215ENST00000464425 PNPP00491 289 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 CA6P23280 308 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 C21orf33P30042 268 aaPredicted RBP14.39□□□□□ -0.11
VPS52-215ENST00000464425 MRPL28Q13084 256 aaKnown RBP14.39□□□□□ -0.11
VPS52-215ENST00000464425 FDX2Q6P4F2 183 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 TMPRSS11AQ6ZMR5 421 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 OR56B2PQ8NGI1 322 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 RORBQ92753 470 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 RAB1CQ92928 201 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 ITFG2Q969R8 447 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 MEGF10Q96KG7 1140 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 CDCA4Q9BXL8 241 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 GCM1Q9NP62 436 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 TMEM106BQ9NUM4 274 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 PAK1IP1Q9NWT1 392 aaPredicted RBP14.39□□□□□ -0.11
VPS52-215ENST00000464425 NUFIP1Q9UHK0 495 aaKnown RBP14.39□□□□□ -0.11
VPS52-215ENST00000464425 PPP1R3CQ9UQK1 317 aa14.39□□□□□ -0.11
VPS52-215ENST00000464425 A0A0U1RQV5 110 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 J3QLW9 94 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 TGFAP01135 160 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 ZNF19P17023 458 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 CFL1P23528 166 aaKnown RBP14.38□□□□□ -0.11
VPS52-215ENST00000464425 SRP9P49458 86 aaKnown RBP14.38□□□□□ -0.11
VPS52-215ENST00000464425 FAM3AP98173 230 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 SLC3A1Q07837 685 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 OR8G1Q15617 311 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 KLHL36Q8N4N3 616 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 OR52N1Q8NH53 320 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 ZNF420Q8TAQ5 688 aaPredicted RBP14.38□□□□□ -0.11
VPS52-215ENST00000464425 DVL3Q92997 716 aaPredicted RBP14.38□□□□□ -0.11
VPS52-215ENST00000464425 RNF166Q96A37 237 aaPredicted RBP14.38□□□□□ -0.11
VPS52-215ENST00000464425 PELI1Q96FA3 418 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 C4orf36Q96KX1 117 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 SIGLEC11Q96RL6 698 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 PBOV1Q9GZY1 135 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 ISG20L2Q9H9L3 353 aaKnown RBP14.38□□□□□ -0.11
VPS52-215ENST00000464425 G6PC2Q9NQR9 355 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 ACOXLQ9NUZ1 547 aa14.38□□□□□ -0.11
VPS52-215ENST00000464425 MALRD1Q5VYJ5 2156 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 DYSFO75923 2080 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 A0A1B0GWJ7 208 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 ISPDA4D126 451 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 LOC110117498-PIK3R3F6TDL0 507 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 RPP14O95059 124 aaKnown RBP14.37□□□□□ -0.11
VPS52-215ENST00000464425 MFGE8Q08431 387 aaPredicted RBP14.37□□□□□ -0.11
VPS52-215ENST00000464425 FAM166AQ6J272 317 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 PEG10Q86TG7 708 aaKnown RBP14.37□□□□□ -0.11
VPS52-215ENST00000464425 MOGAT3Q86VF5 341 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 CATSPERDQ86XM0 798 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 ELMOD2Q8IZ81 293 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 OR8B12Q8NGG6 310 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 MRPL15Q9P015 296 aaKnown RBP14.37□□□□□ -0.11
VPS52-215ENST00000464425 CLEC2DQ9UHP7 191 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 OR52A1Q9UKL2 312 aa14.37□□□□□ -0.11
VPS52-215ENST00000464425 RGS10O43665 173 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 MRPS14O60783 128 aaKnown RBP14.36□□□□□ -0.11
VPS52-215ENST00000464425 IGLV3-1P01715 115 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 TTRP02766 147 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 GSK3AP49840 483 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 CCR9P51686 369 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 GBX2P52951 348 aaPredicted RBP14.36□□□□□ -0.11
VPS52-215ENST00000464425 GABARAPL2P60520 117 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 LMO4P61968 165 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 MAB21L1Q13394 359 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 CCDC58Q4VC31 144 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 BCL2L15Q5TBC7 163 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 PRSS48Q7RTY5 328 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 NANOGP1Q8N7R0 232 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 LINC01356Q8N9X3 169 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 ZNF485Q8NCK3 441 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 ADAT1Q9BUB4 502 aaKnown RBP14.36□□□□□ -0.11
VPS52-215ENST00000464425 SLC22A4Q9H015 551 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 LPAR2Q9HBW0 351 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 BABAM2Q9NXR7 383 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 ERVK-18Q9QC07 812 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 ERGIC3Q9Y282 383 aa14.36□□□□□ -0.11
VPS52-215ENST00000464425 NPTNQ9Y639 398 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms