RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	BANF2	Q9H503	90 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	LSM2	Q9Y333	95 aa	Known RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	TDRD6	O60522	2096 aa	Known RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004		A0A0U1RQV5	110 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004		M0R1B8	84 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	ONECUT2	O95948	504 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	GRP	P07492	148 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	GIP	P09681	153 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	COX5B	P10606	129 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	DGCR2	P98153	550 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	KISS1	Q15726	138 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	FAM76B	Q5HYJ3	339 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF774	Q6NX45	483 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	SLC25A47	Q6Q0C1	308 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	LINC00114	Q6XXX2	140 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	ASB5	Q8WWX0	329 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	DCUN1D4	Q92564	292 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	RNF32	Q9H0A6	362 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	FN3KRP	Q9HA64	309 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	HRASLS	Q9HDD0	168 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	C12orf4	Q9NQ89	552 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	B3GNT2	Q9NY97	397 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	COPS3	Q9UNS2	423 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	GSTZ1	O43708	216 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	TIAF1	O95411	115 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	FST	P19883	344 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	PTGFR	P43088	359 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	TMPRSS3	P57727	454 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	RPS27A	P62979	156 aa	Known RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	UBA52	P62987	128 aa	Known RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	FDX2	Q6P4F2	183 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	SLC25A26	Q70HW3	274 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	OR10J5	Q8NHC4	309 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	WNT2B	Q93097	391 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	UBL7	Q96S82	380 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	SLCO1B1	Q9Y6L6	691 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004		J3QW42	95 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	NME2P1	O60361	137 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	NME2	P22392	152 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	SLC25A35	Q3KQZ1	300 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	SLC7A6	Q92536	515 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	PBDC1	Q9BVG4	233 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	OR2H1	Q9GZK4	316 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	RDH8	Q9NYR8	311 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	IGKV1D-42	A0A075B6H8	117 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	DHRS7C	A6NNS2	312 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF732	B4DXR9	585 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	CNOT4	O95628	575 aa	Known RBP	10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	BLOC1S1	P78537	153 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF239	Q16600	458 aa	Known RBP	10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	S100A7A	Q86SG5	101 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	C20orf196	Q8IYI0	205 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF519	Q8TB69	540 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ST3GAL6	Q9Y274	331 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	TOX	O94900	526 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	IFNA2	P01563	188 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	GLRA1	P23415	457 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	S100A7	P31151	101 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	OR8B8	Q15620	311 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	KANSL1	Q7Z3B3	1105 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF441	Q8N8Z8	693 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	OR5M9	Q8NGP3	310 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	EDARADD	Q8WWZ3	215 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	POM121	Q96HA1	1249 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	SDHAF2	Q9NX18	166 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	MTFP1	Q9UDX5	166 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	LAMP3	Q9UQV4	416 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ZDBF2	Q9HCK1	2354 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	BET1	O15155	118 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	NRN1L	Q496H8	165 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	AADACL3	Q5VUY0	350 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	SLC22A25	Q6T423	547 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ZDHHC22	Q8N966	263 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	OR51S1	Q8NGJ8	323 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	FRRS1L	Q9P0K9	344 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	ST6GALNAC2	Q9UJ37	374 aa		10.41	□□□□□ -0.74
RBM39-223	ENST00000463004	IGLV1-36	A0A0B4J1U3	117 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	HAAO	P46952	286 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	DHODH	Q02127	395 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	HAGHL	Q6PII5	290 aa	Predicted RBP	10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	NHLRC1	Q6VVB1	395 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	TUSC5	Q8IXB3	177 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	OR8B12	Q8NGG6	310 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	LINC00470	Q9BZP3	86 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	ACKR4	Q9NPB9	350 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	KIF25	Q9UIL4	384 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	FLVCR1	Q9Y5Y0	555 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	TMEM235	A6NFC5	223 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	BOLA2-SMG1P6	H3BVE0	249 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	PGA4	P0DJD7	388 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	PGA3	P0DJD8	388 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	SELENOP	P49908	381 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	CRYBA2	P53672	197 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	PLA1A	Q53H76	456 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	FAM27D1	Q5T7N8	215 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	CD200R1L	Q6Q8B3	271 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	WFDC8	Q8IUA0	241 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	FADS6	Q8N9I5	356 aa		10.4	□□□□□ -0.74
RBM39-223	ENST00000463004	TMEM45B	Q96B21	275 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms