RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 UPRTQ96BW1 309 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 RAB3IPQ96QF0 476 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 IL4I1Q96RQ9 567 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC29A1Q99808 456 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 TTTY10Q9BZA0 68 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 YIPF3Q9GZM5 350 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLITRK2Q9H156 845 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 ADGRL4Q9HBW9 690 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 DNAJC27Q9NZQ0 273 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 IL19Q9UHD0 177 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 LRP12Q9Y561 859 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 DSCAML1Q8TD84 2053 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 COL7A1Q02388 2944 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 TRAV40A0A0B4J280 105 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 POM121CA8CG34 1229 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 TMEM178BH3BS89 294 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 PSMD9O00233 223 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 DLGAP1O14490 977 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 XRCC2O43543 280 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 SRSF10O75494 262 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 PTBP3O95758 552 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 HLA-DPB1P04440 258 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 ANXA2P07355 339 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 H2BFMP0C1H6 154 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 PPIAL4GP0DN37 164 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 TNFSF4P23510 183 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 HSD11B1P28845 292 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 MDH2P40926 338 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 PMELP40967 661 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 CD200P41217 278 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 ALDH3A2P51648 485 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 PSMA6P60900 246 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 FAM3AP98173 230 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 HOXA4Q00056 320 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 SRSF4Q08170 494 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 MAB21L1Q13394 359 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 TAF13Q15543 124 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 OCLNQ16625 522 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 FAM57BQ71RH2 274 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 SSX6Q7RTT6 188 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 MRPL21Q7Z2W9 205 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 GID4Q8IVV7 300 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC35F2Q8IXU6 374 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 CBR4Q8N4T8 237 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR8B12Q8NGG6 310 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR13G1Q8NGZ3 307 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF420Q8TAQ5 688 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 THEM6Q8WUY1 208 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 UBE2FQ969M7 185 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 EME1Q96AY2 570 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 SGK3Q96BR1 496 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 REEP6Q96HR9 211 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 HRASLS5Q96KN8 279 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 LYZL4Q96KX0 146 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF582Q96NG8 517 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR8B4Q96RC9 309 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 CNN2Q99439 309 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 MRI1Q9BV20 369 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 TEX12Q9BXU0 123 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 PRRG3Q9BZD7 231 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 OPA3Q9H6K4 179 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 PPP1R3EQ9H7J1 279 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 GCM1Q9NP62 436 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 TMEM100Q9NV29 134 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 HAO2Q9NYQ3 351 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 ENOPH1Q9UHY7 261 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 LAMP5Q9UJQ1 280 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 LRCH1Q9Y2L9 728 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 MMP24Q9Y5R2 645 aa6.6□□□□□ -1.35
CDC42BPA-210ENST00000462553 NOTCH3Q9UM47 2321 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 IGHV2-70DA0A0C4DH43 119 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 A0A0G2JK05 382 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 IGHV3-64DA0A0J9YX35 117 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 TBX1O43435 398 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 APOL3O95236 402 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 IGLV3-1P01715 115 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 WNT2P09544 360 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 GABRB1P18505 474 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 TNFRSF1AP19438 455 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 CA6P23280 308 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 OMGP23515 440 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 ACKR3P25106 362 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 HTR1FP30939 366 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 GATA4P43694 442 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC15A1P46059 708 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 RELBQ01201 579 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 ROM1Q03395 351 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 MFGE8Q08431 387 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR8B8Q15620 311 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 TIGD6Q17RP2 521 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZIK1Q3SY52 487 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 ESCO2Q56NI9 601 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 PRAMEF6Q5VXH4 476 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 DEGS2Q6QHC5 323 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 WDR86Q86TI4 376 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 MOGAT3Q86VF5 341 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR8J1Q8NGP2 316 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 FAM81AQ8TBF8 368 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms