RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 LYNP07948 512 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 H2BFMP0C1H6 154 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 PRR23D2P0DMB1 279 aaPredicted RBP18.85■□□□□ 0.61
PTPN4-207ENST00000460162 GSK3AP49840 483 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 PDCD1Q15116 288 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 MICBQ29980 383 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 GFOD2Q3B7J2 385 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 KLHL12Q53G59 568 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 WDR82Q6UXN9 313 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 Q6YL49 198 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 AQP12AQ8IXF9 295 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 C11orf53Q8IXP5 236 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 ZNF454Q8N9F8 522 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 OTOSQ8NHW6 89 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 TMIGD2Q96BF3 282 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 C12orf43Q96C57 262 aaKnown RBP18.85■□□□□ 0.61
PTPN4-207ENST00000460162 PGAM5Q96HS1 289 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 CLPTM1LQ96KA5 538 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 SLITRK2Q9H156 845 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 TLNRD1Q9H1K6 362 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 OR51V1Q9H2C8 321 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 ABCB9Q9NP78 766 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 TAS2R1Q9NYW7 299 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 IGHV3OR15-7A0A075B7D8 119 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 CENPVL3A0A0U1RRI6 287 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 ANXA2P2A6NMY6 339 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 FCN3O75636 299 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 CSNK2BP67870 215 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 IL5RAQ01344 420 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 PLBD1Q6P4A8 553 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 BTN2A1Q7KYR7 527 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 ST8SIA4Q92187 359 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 ITPKCQ96DU7 683 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 FAM71F1Q96KD3 344 aaPredicted RBP18.84■□□□□ 0.61
PTPN4-207ENST00000460162 RASSF4Q9H2L5 321 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 PDP1Q9P0J1 537 aaPredicted RBP18.84■□□□□ 0.61
PTPN4-207ENST00000460162 ZNF319Q9P2F9 582 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 RHBDD3Q9Y3P4 386 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 MMP24Q9Y5R2 645 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 POMT1Q9Y6A1 747 aa18.84■□□□□ 0.61
PTPN4-207ENST00000460162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.83■□□□□ 0.6
PTPN4-207ENST00000460162 GNGT2O14610 69 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 MDKP21741 143 aaPredicted RBP18.83■□□□□ 0.6
PTPN4-207ENST00000460162 POU1F1P28069 291 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 NAA10P41227 235 aaPredicted RBP18.83■□□□□ 0.6
PTPN4-207ENST00000460162 PSMA6P60900 246 aaKnown RBP18.83■□□□□ 0.6
PTPN4-207ENST00000460162 SLC36A1Q7Z2H8 476 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.83■□□□□ 0.6
PTPN4-207ENST00000460162 GALNT4Q8N4A0 578 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 CANT1Q8WVQ1 401 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 MICU1Q9BPX6 476 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 RTL8AQ9BWD3 113 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 ZNF556Q9HAH1 456 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 BRD7Q9NPI1 651 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 ACOXLQ9NUZ1 547 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 RPUSD1Q9UJJ7 312 aaKnown RBP18.83■□□□□ 0.6
PTPN4-207ENST00000460162 ZNF391Q9UJN7 358 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 MPC1Q9Y5U8 109 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 TRRAPQ9Y4A5 3859 aa18.83■□□□□ 0.6
PTPN4-207ENST00000460162 IGHV1-69DA0A0B4J2H0 117 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 A0A1B0GUS0 222 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 SELENOFO60613 162 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 IGHV1-69P01742 117 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 HMGN1P05114 100 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 MELTFP08582 738 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 OSMP13725 252 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 GINS1Q14691 196 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 WDR38Q5JTN6 314 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 TMEM179BQ7Z7N9 219 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 SSMEM1Q8WWF3 244 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 DMRTB1Q96MA1 342 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 THTPAQ9BU02 230 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 NIPAL2Q9H841 368 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 KPTNQ9Y664 436 aa18.82■□□□□ 0.6
PTPN4-207ENST00000460162 FAM181BA6NEQ2 426 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 TMEM210A6NLX4 147 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 GPR37O15354 613 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 E2F6O75461 281 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 RPL15P61313 204 aaKnown RBP18.81■□□□□ 0.6
PTPN4-207ENST00000460162 POU4F2Q12837 409 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 CDONQ4KMG0 1287 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 SLC35D3Q5M8T2 416 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 FIP1L1Q6UN15 594 aaKnown RBP18.81■□□□□ 0.6
PTPN4-207ENST00000460162 OR10Z1Q8NGY1 313 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 OR4F5Q8NH21 305 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 THEM6Q8WUY1 208 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 TAF15Q92804 592 aaKnown RBP eCLIP18.81■□□□□ 0.6
PTPN4-207ENST00000460162 LHX4Q969G2 390 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 CHIAQ9BZP6 476 aa18.81■□□□□ 0.6
PTPN4-207ENST00000460162 A0A1B0GVI7 797 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 A0A1B0GW55 424 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 CDIPTO14735 213 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 CST4P01036 141 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 CRYBA1P05813 215 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4L2P0CJ85 424 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4L3P0CJ86 424 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4L4P0CJ87 422 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4L5P0CJ88 424 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4L6P0CJ89 424 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4L7P0CJ90 424 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms