RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LYPD6Q86Y78 171 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.96□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF101Q8IZC7 436 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 ZSCAN4Q8NAM6 433 aaPredicted RBP10.96□□□□□ -0.66
LINC00959-201ENST00000456581 OR10S1Q8NGN2 331 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 OR51F2Q8NH61 342 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 OR51E1Q8TCB6 317 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 ST8SIA1Q92185 356 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 USB1Q9BQ65 265 aaKnown RBP10.96□□□□□ -0.66
LINC00959-201ENST00000456581 C19orf25Q9UFG5 118 aaPredicted RBP10.96□□□□□ -0.66
LINC00959-201ENST00000456581 NPIPA1Q9UND3 350 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 SHANK1Q9Y566 2161 aa10.96□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM218A2RU14 115 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 SDCBPO00560 298 aaPredicted RBP10.95□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM127O75204 238 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF205O95201 554 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 F10P00742 488 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 H2BFMP0C1H6 154 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 CCL3P10147 92 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 RAB3AP20336 220 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 CFPP27918 469 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 AGTR1P30556 359 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 AWAT2Q6E213 333 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 H1FNTQ75WM6 255 aaPredicted RBP10.95□□□□□ -0.66
LINC00959-201ENST00000456581 ANGPTL5Q86XS5 388 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 OR5AP2Q8NGF4 316 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 THAP6Q8TBB0 222 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 JSRP1Q96MG2 331 aaPredicted RBP10.95□□□□□ -0.66
LINC00959-201ENST00000456581 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 SLC17A5Q9NRA2 495 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF319Q9P2F9 582 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 BOD1L1Q8NFC6 3051 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF407Q9C0G0 2248 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 LIPT2A6NK58 231 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 M0R296 226 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 RAD51DO75771 328 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 APOBEC1P41238 236 aaKnown RBP10.95□□□□□ -0.66
LINC00959-201ENST00000456581 OR3A4PP47883 348 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 HSF1Q00613 529 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 MICBQ29980 383 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 PLAC9Q5JTB6 97 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 PNLDC1Q8NA58 520 aaKnown RBP10.95□□□□□ -0.66
LINC00959-201ENST00000456581 INO80EQ8NBZ0 244 aaPredicted RBP10.95□□□□□ -0.66
LINC00959-201ENST00000456581 OR2M3Q8NG83 312 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 MITD1Q8WV92 249 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 RNF138Q8WVD3 245 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 IMMP1LQ96LU5 166 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 OR5B2Q96R09 309 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 C12orf57Q99622 126 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 OR5AC2Q9NZP5 309 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 GLS2Q9UI32 602 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 PRELID3BQ9Y3B1 194 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 R4GN57 208 aa10.95□□□□□ -0.66
LINC00959-201ENST00000456581 MED19A0JLT2 244 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 OR2F2O95006 317 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 DUSP3P51452 185 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 BIDP55957 195 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 FGL1Q08830 312 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 OR2F1Q13607 317 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 SLC22A8Q8TCC7 542 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 ASB10Q8WXI3 467 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 C11orf40Q8WZ69 217 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 FOXRED1Q96CU9 486 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 DDIT4LQ96D03 193 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 PHB2Q99623 299 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 CHMP1AQ9HD42 196 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 B3GAT1Q9P2W7 334 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 MAP1BP46821 2468 aaKnown RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 SYT7O43581 403 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 FARS2O95363 451 aaKnown RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 MPIG6BO95866 241 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 MELTFP08582 738 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 SP9P0CG40 484 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 SPP1P10451 314 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 RCC1P18754 421 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 FSTP19883 344 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM176BQ3YBM2 270 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 TIPARPQ7Z3E1 657 aaKnown RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM17Q86X19 198 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 MFSD8Q8NHS3 518 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 SLAMF6Q96DU3 332 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 FAM71F1Q96KD3 344 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 HRH4Q9H3N8 390 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 SCPEP1Q9HB40 452 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 CHST11Q9NPF2 352 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 SERINC1Q9NRX5 453 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF175Q9Y473 711 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 DOCK7Q96N67 2140 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 NBEAQ8NFP9 2946 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF705EA8MWA4 302 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 C9J4A7 227 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 IFNA6P05013 189 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 OTX2P32243 289 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 PRSS12P56730 875 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 MST1LQ2TV78 715 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 HAGHLQ6PII5 290 aaPredicted RBP10.94□□□□□ -0.66
LINC00959-201ENST00000456581 GTPBP8Q8N3Z3 284 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms