RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 IGLV3-16A0A075B6K0 115 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 A0A1W2PPC4 97 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 C9orf170A2RU37 121 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 PNLIPP16233 465 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 CXCL2P19875 107 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 INSM1Q01101 510 aaPredicted RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 MESTQ5EB52 335 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 TXN2Q99757 166 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 UTP23Q9BRU9 249 aaKnown RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 ELF5Q9UKW6 265 aaPredicted RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 TRAV8-7A0A075B6U6 113 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 TRAV39A0A0B4J263 110 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 MBTPS2O43462 519 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 GRB2P62993 217 aaKnown RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 CATR1Q13166 79 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 RAB31Q13636 194 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 CD226Q15762 336 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 MSMO1Q15800 293 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 DMKNQ6E0U4 476 aaPredicted RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 LPCAT3Q6P1A2 487 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 MRGPREQ86SM8 312 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 SEH1LQ96EE3 360 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 SCPEP1Q9HB40 452 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 MYH10P35580 1976 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 C17orf112F2Z3M2 114 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 F6UZH7 168 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 CFDP00746 253 aaPredicted RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 PCBD1P61457 104 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 ELAVL1Q15717 326 aaKnown RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 NKAIN1Q4KMZ8 207 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 TMEM65Q6PI78 240 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 POM121Q96HA1 1249 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 HIF1ANQ9NWT6 349 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 PSENENQ9NZ42 101 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 NDRG3Q9UGV2 375 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 KIAA1551Q9HCM1 1747 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 H0YIG0 161 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 OR10J4P0C629 311 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
RIF1-206ENST00000453091 ZNF90Q03938 601 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 EGR3Q06889 387 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 HMGN3Q15651 99 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 OR2A2Q6IF42 318 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 DUSP18Q8NEJ0 188 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 UHRF2Q96PU4 802 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 DUSP23Q9BVJ7 150 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 ADAM19Q9H013 955 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 IFT22Q9H7X7 185 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 UBE2L5PA0A1B0GUS4 154 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 H7BYZ3 331 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 PRICKLE4Q2TBC4 344 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 OR5M9Q8NGP3 310 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 OR10J5Q8NHC4 309 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 TMEM37Q8WXS4 190 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 FRRS1LQ9P0K9 344 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 CLCF1Q9UBD9 225 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 ST3GAL6Q9Y274 331 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 HS3ST3A1Q9Y663 406 aa6.94□□□□□ -1.3
RIF1-206ENST00000453091 NRASP01111 189 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 HBE1P02100 147 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 OR8U8P0C7N1 319 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 APOBEC1P41238 236 aaKnown RBP6.93□□□□□ -1.3
RIF1-206ENST00000453091 TMPRSS11FQ6ZWK6 438 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 ZNF429Q86V71 674 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 FBXL14Q8N1E6 418 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 LHX4Q969G2 390 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 SLC17A4Q9Y2C5 497 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 CER1O95813 267 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 IGHV3-43DP0DP04 118 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 CTLA4P16410 223 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 SLC6A1P30531 599 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 CLDN15P56746 228 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 FAM53BQ14153 422 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 LILRA6Q6PI73 481 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 PINX1Q96BK5 328 aaKnown RBP6.93□□□□□ -1.3
RIF1-206ENST00000453091 TRIB1Q96RU8 372 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 PHF7Q9BWX1 381 aaPredicted RBP6.93□□□□□ -1.3
RIF1-206ENST00000453091 MTFP1Q9UDX5 166 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 MYH15Q9Y2K3 1946 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 SOCS1O15524 211 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 PIAS2O75928 621 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 FOSL1P15407 271 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 MPGP29372 298 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 BVESQ8NE79 360 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 DAZAP1Q96EP5 407 aaKnown RBP6.93□□□□□ -1.3
RIF1-206ENST00000453091 SCMH1Q96GD3 660 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 LINC00615Q96LM1 132 aaPredicted RBP6.93□□□□□ -1.3
RIF1-206ENST00000453091 AKAP11Q9UKA4 1901 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 A0A1W2PNV4 684 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 A0A1W2PPE2 198 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 CDRT15L2A8MXV6 281 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 PATE3B3GLJ2 98 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 RCC1P18754 421 aaPredicted RBP6.93□□□□□ -1.3
RIF1-206ENST00000453091 OR8B8Q15620 311 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 PRAMEF5Q5TYX0 476 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 PRAMEF6Q5VXH4 476 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 GGNBP1Q5YKI7 109 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 PRR27Q6MZM9 219 aa6.93□□□□□ -1.3
RIF1-206ENST00000453091 OR1L3Q8NH93 324 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms