RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 OOEPA6NGQ2 149 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 C22orf46C9J442 243 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 M0R129 80 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 LGALS8O00214 317 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 PSMD9O00233 223 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 DNAJC8O75937 253 aaPredicted RBP7.22□□□□□ -1.25
RFX3-209ENST00000451859 HMGN1P05114 100 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 LYNP07948 512 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 CFPP27918 469 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 GNALP38405 381 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 OPRL1P41146 370 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 HCCSP53701 268 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 FGF12P61328 243 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 ELF3P78545 371 aaPredicted RBP7.22□□□□□ -1.25
RFX3-209ENST00000451859 PAX2Q02962 417 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 PAX8Q06710 450 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 BAMBIQ13145 260 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 APOFQ13790 326 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 GK3PQ14409 553 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 LRRN1Q6UXK5 716 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 BRD3OSQ6XYD6 125 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 KCTD8Q6ZWB6 473 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 SHFQ7M4L6 423 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 WDR86Q86TI4 376 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 TIGD4Q8IY51 512 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 OTOSQ8NHW6 89 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 LRRC29Q8WV35 223 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 ZFAND2BQ8WV99 257 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 RNF133Q8WVZ7 376 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 TAF15Q92804 592 aaKnown RBP eCLIP7.22□□□□□ -1.25
RFX3-209ENST00000451859 ERGIC1Q969X5 290 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 SPSB4Q96A44 273 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 SLC7A6OSQ96CW6 309 aaPredicted RBP7.22□□□□□ -1.25
RFX3-209ENST00000451859 PCGF1Q9BSM1 259 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 TOR3AQ9H497 397 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 OPA3Q9H6K4 179 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 YY1AP1Q9H869 796 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 NTN4Q9HB63 628 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 SMURF1Q9HCE7 757 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 TNFRSF19Q9NS68 423 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 C14orf119Q9NWQ9 140 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 TVP23BQ9NYZ1 205 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 ZNF319Q9P2F9 582 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 ERVK-18Q9QC07 812 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 CTSZQ9UBR2 303 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 DNAJB9Q9UBS3 223 aa7.22□□□□□ -1.25
RFX3-209ENST00000451859 TRAV38-1A0A0B4J264 116 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 hCG_38984A0A1B0GV85 526 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 A0A1B0GW55 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 TCRBV3S1A0A5B6 114 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 ZNF850A8MQ14 1090 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 PHYHO14832 338 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 TMPRSS2O15393 492 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 PRODHO43272 600 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 PAX4O43316 350 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 ENSAO43768 121 aaKnown RBP7.21□□□□□ -1.26
RFX3-209ENST00000451859 APOC1P02654 83 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 SFTPBP07988 381 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4L2P0CJ85 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4L3P0CJ86 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4L4P0CJ87 422 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4L5P0CJ88 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4L6P0CJ89 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4L7P0CJ90 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 ANXA8P13928 327 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DDOSTP39656 456 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 PSMB10P40306 273 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 CDK5Q00535 292 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 MZT1Q08AG7 82 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 KCNJ8Q15842 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 SNAPC1Q16533 368 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 AWAT1Q58HT5 328 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 RUSC1-AS1Q66K80 236 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4L9Q6RFH8 374 aaPredicted RBP7.21□□□□□ -1.26
RFX3-209ENST00000451859 DOK3Q7L591 496 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 KRT77Q7Z794 578 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 COMMD2Q86X83 199 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 FGFRL1Q8N441 504 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 GCSAMQ8N6F7 178 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 OR8B12Q8NGG6 310 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 OR52H1Q8NGJ2 320 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 ST8SIA4Q92187 359 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 PIGCQ92535 297 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 UPRTQ96BW1 309 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 SEH1LQ96EE3 360 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 C1orf147Q96MC9 270 aaPredicted RBP7.21□□□□□ -1.26
RFX3-209ENST00000451859 TEX12Q9BXU0 123 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 SP140LQ9H930 580 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 PAPOLBQ9NRJ5 636 aaKnown RBP7.21□□□□□ -1.26
RFX3-209ENST00000451859 DUX4Q9UBX2 424 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 LAMP5Q9UJQ1 280 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 RHBDD3Q9Y3P4 386 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 LRP12Q9Y561 859 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 DSCAML1Q8TD84 2053 aa7.21□□□□□ -1.26
RFX3-209ENST00000451859 KIR2DS1A0A191URI9 304 aa7.2□□□□□ -1.26
RFX3-209ENST00000451859 TMEM89A2RUT3 159 aa7.2□□□□□ -1.26
RFX3-209ENST00000451859 ANXA2P2A6NMY6 339 aa7.2□□□□□ -1.26
RFX3-209ENST00000451859 PTBP3O95758 552 aaKnown RBP7.2□□□□□ -1.26
RFX3-209ENST00000451859 TFF1P04155 84 aa7.2□□□□□ -1.26
RFX3-209ENST00000451859 SLC2A5P22732 501 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms