RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 IKZF2Q9UKS7 526 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 LRCH1Q9Y2L9 728 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 SVEP1Q4LDE5 3571 aa10.65□□□□□ -0.71
PRPF40A-203ENST00000448428 A0A0U1RQV5 110 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 A6NLC8 198 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF850A8MQ14 1090 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 TNFRSF13BO14836 293 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 SRSF10O75494 262 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 CST4P01036 141 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 HTR1FP30939 366 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 CD80P33681 288 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 GNALP38405 381 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 PAX2Q02962 417 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 MFGE8Q08431 387 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF154Q13106 437 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 PRDX4Q13162 271 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 SNCBQ16143 134 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 ZIK1Q3SY52 487 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 C1QL2Q7Z5L3 287 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 CBR4Q8N4T8 237 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 OR1M1Q8NGA1 313 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 PIGCQ92535 297 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 EME1Q96AY2 570 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 HRASLS5Q96KN8 279 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 RAB3IPQ96QF0 476 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 SSBP3Q9BWW4 388 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 OCEL1Q9H607 264 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 S100A14Q9HCY8 104 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF391Q9UJN7 358 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 ORC6Q9Y5N6 252 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 INSIG2Q9Y5U4 225 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 MPC1Q9Y5U8 109 aa10.64□□□□□ -0.71
PRPF40A-203ENST00000448428 hCG_1807616A0A1W2PRN6 198 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 ANXA2P2A6NMY6 339 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 E9PQ18 207 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF670-ZNF695F2Z2N8 137 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 LGALS8O00214 317 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 PHYHO14832 338 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 APOL3O95236 402 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 IGLV3-1P01715 115 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF12P17014 697 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 PSMB10P40306 273 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 MAP2K3P46734 347 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 PITPNBP48739 271 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 ALDH3A2P51648 485 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 CDC42P60953 191 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 GNB2P62879 340 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 CSNK2BP67870 215 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 IL5RAQ01344 420 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 EGR3Q06889 387 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF829Q3KNS6 432 aaPredicted RBP10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 KRTAP24-1Q3LI83 254 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF841Q6ZN19 808 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 NLRC3Q7RTR2 1065 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 SSX6Q7RTT6 188 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 PHC2Q8IXK0 858 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 GALNT4Q8N4A0 578 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 FTMTQ8N4E7 242 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 GCSAMQ8N6F7 178 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 TEX29Q8N6K0 151 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 OR8B3Q8NGG8 313 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 NANPQ8TBE9 248 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 FAM81AQ8TBF8 368 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 OR51E1Q8TCB6 317 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 TRUB1Q8WWH5 349 aaKnown RBP10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 OR5P3Q8WZ94 311 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 OR8B2Q96RD0 313 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 TBX5Q99593 518 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 SLC29A1Q99808 456 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 MICU1Q9BPX6 476 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 FGF23Q9GZV9 251 aaPredicted RBP10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 RNPEPL1Q9HAU8 725 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 GPR84Q9NQS5 396 aa10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 MRM2Q9UI43 246 aaKnown RBP10.63□□□□□ -0.71
PRPF40A-203ENST00000448428 MXRA5Q9NR99 2828 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 IGHV3OR15-7A0A075B7D8 119 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 TRAV38-1A0A0B4J264 116 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 A0A1W2PQL4 384 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 OOEPA6NGQ2 149 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 LOC110117498-PIK3R3F6TDL0 507 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 CDIPTO14735 213 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 TCF21O43680 179 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 FSHBP01225 129 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 TTRP02766 147 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 OR2T7P0C7T2 308 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 EGR1P18146 543 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 EPHA1P21709 976 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 PAX8Q06710 450 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 POU4F2Q12837 409 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 TMED1Q13445 227 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 KCNJ8Q15842 424 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 LIPNQ5VXI9 398 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 WDR25Q64LD2 544 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 WDR82Q6UXN9 313 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 PLEKHG7Q6ZR37 379 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 KRT74Q7RTS7 529 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms