RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 TUSC1Q2TAM9 212 aa14.07□□□□□ -0.16
SHQ1-202ENST00000444040 AGBL5Q8NDL9 886 aa14.07□□□□□ -0.16
SHQ1-202ENST00000444040 MAFAQ8NHW3 353 aaPredicted RBP14.07□□□□□ -0.16
SHQ1-202ENST00000444040 CASTOR1Q8WTX7 329 aa14.07□□□□□ -0.16
SHQ1-202ENST00000444040 V9GYS6 101 aa14.07□□□□□ -0.16
SHQ1-202ENST00000444040 A0A0U1RQV5 110 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 FOXI3A8MTJ6 420 aaPredicted RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 F5H5K5 113 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 NAT2P11245 290 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 TDGF1P13385 188 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 GUCA1AP43080 201 aaPredicted RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 Q6ZSR3 168 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 OVCH2Q7RTZ1 564 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 HSD17B13Q7Z5P4 300 aaPredicted RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 WDR5BQ86VZ2 330 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 ARRDC1Q8N5I2 433 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 ZIC4Q8N9L1 334 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 RELL2Q8NC24 303 aaPredicted RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 GALNT11Q8NCW6 608 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 OR9K2Q8NGE7 335 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 IER2Q9BTL4 223 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 SLC25A32Q9H2D1 315 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 FOXD3Q9UJU5 478 aaPredicted RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 GPR132Q9UNW8 380 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 SPEF1Q9Y4P9 236 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 DHHO43323 396 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 FAM189A2Q15884 450 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 EIF4E3Q8N5X7 224 aaKnown RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 BVESQ8NE79 360 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 OR2Y1Q8NGV0 311 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 VRK1Q99986 396 aaPredicted RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 URM1Q9BTM9 101 aaKnown RBP14.06□□□□□ -0.16
SHQ1-202ENST00000444040 SESN1Q9Y6P5 492 aa14.06□□□□□ -0.16
SHQ1-202ENST00000444040 LOC105371267A0A1B0GV96 52 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 NPIPA2E9PIF3 369 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 NPIPA3F8WFD2 350 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 TEX46H3BTG2 121 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 BCL2L11O43521 198 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 DHRS3O75911 302 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 PTGFRP43088 359 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 TRA2AQ13595 282 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 UBE2V2Q15819 145 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 ACTBL2Q562R1 376 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 ACOT7LQ6ZUV0 252 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 KCTD9Q7L273 389 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 LRRC18Q8N456 261 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 OR10A2Q9H208 303 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 C5orf66Q9H5L9 145 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 RASL12Q9NYN1 266 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 COQ3Q9NZJ6 369 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 WDR87Q6ZQQ6 2873 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 A0A0J9YW62 118 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 FAM25EA8MYX2 175 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 PATE3B3GLJ2 98 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 MASP2O00187 686 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 HOXD4P09016 255 aaPredicted RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 THBS4P35443 961 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 NUP62P37198 522 aaPredicted RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 SUCLG1P53597 346 aaKnown RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 MC2RQ01718 297 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 RPS19BP1Q86WX3 136 aaKnown RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 UBALD2Q8IYN6 164 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 OR5D18Q8NGL1 313 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 TMEM230Q96A57 120 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 GHRLQ9UBU3 117 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 NCOA6Q14686 2063 aaPredicted RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 KANTRA0A1W2PQU2 76 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 C9J4A7 227 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 KRBOX1C9JBD0 128 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 LGALS8O00214 317 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 DLSTP36957 453 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 SLC6A9P48067 706 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 MLF1P58340 268 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 TAS2R31P59538 309 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 CSNK2A1P68400 391 aaPredicted RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 TMEM128Q5BJH2 165 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 ZNF468Q5VIY5 522 aaPredicted RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 PNLDC1Q8NA58 520 aaKnown RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 JSRP1Q96MG2 331 aaPredicted RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 NAA11Q9BSU3 229 aaPredicted RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 RBM24Q9BX46 236 aaKnown RBP14.05□□□□□ -0.16
SHQ1-202ENST00000444040 DKKL1Q9UK85 242 aa14.05□□□□□ -0.16
SHQ1-202ENST00000444040 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
SHQ1-202ENST00000444040 RAC1P63000 192 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 ATXN7L3Q14CW9 347 aaPredicted RBP14.04□□□□□ -0.16
SHQ1-202ENST00000444040 BEX5Q5H9J7 111 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 TMEM156Q8N614 296 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 TMEM185AQ8NFB2 350 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 NPRL2Q8WTW4 380 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 ZNF837Q96EG3 531 aaPredicted RBP14.04□□□□□ -0.16
SHQ1-202ENST00000444040 SHARPINQ9H0F6 387 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 GPR160Q9UJ42 338 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 STMND1H3BQB6 276 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 FAHP16930 419 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 LUMP51884 338 aaPredicted RBP14.04□□□□□ -0.16
SHQ1-202ENST00000444040 PEAR1Q5VY43 1037 aaPredicted RBP14.04□□□□□ -0.16
SHQ1-202ENST00000444040 SLC16A14Q7RTX9 510 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 PEG10Q86TG7 708 aaKnown RBP14.04□□□□□ -0.16
SHQ1-202ENST00000444040 LHFPL1Q86WI0 220 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms