RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 FUT3P21217 361 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 AKR1C3P42330 323 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 QARSP47897 775 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TTPAP49638 278 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 RBP2P50120 134 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 CAV2P51636 162 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 NDUFV3P56181 108 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAB10P61026 200 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 GTF2BQ00403 316 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 FKBP3Q00688 224 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 MAD2L1BPQ15013 274 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF146Q15072 292 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 CCL14Q16627 93 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 CARD16Q5EG05 197 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 RBM48Q5RL73 367 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TPRG1LQ5T0D9 272 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TMEM42Q69YG0 159 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF774Q6NX45 483 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 GDPGP1Q6ZNW5 385 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 LINC00336Q6ZUF6 198 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 NOXO1Q8NFA2 376 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR1M1Q8NGA1 313 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR4F6Q8NGB9 312 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR5L1Q8NGL2 311 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR5AK3PQ8NH89 298 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 NOL4LQ96MY1 436 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR5M11Q96RB7 305 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 NIPSNAP3BQ9BS92 247 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TMEM208Q9BTX3 173 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ILKAPQ9H0C8 392 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 PARLQ9H300 379 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 NMRAL1Q9HBL8 299 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 MIEF1Q9NQG6 463 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 AGPAT4Q9NRZ5 378 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR12D3Q9UGF7 316 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 MTCH2Q9Y6C9 303 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TNRC18O15417 2968 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 BIVM-ERCC5R4GMW8 1640 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 A0A087X002 238 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 A0A1B0GTI1 187 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 MPTX1A8MV57 137 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 HIDE1A8MVS5 230 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 TSTD3H0UI37 97 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ENSAO43768 121 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 DUS4LO95620 317 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 CD160O95971 181 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 IGF2P01344 180 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 IGHG4P01861 327 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 GABRR1P24046 479 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 CXCR1P25024 350 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 IVDP26440 423 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 GPR1P46091 355 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 PPOXP50336 477 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 DAP3P51398 398 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 RHOAP61586 193 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF154Q13106 437 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 KCNJ11Q14654 390 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 POU2AF1Q16633 256 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 SMIM21Q3B7S5 101 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 PDZD11Q5EBL8 140 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 DCST2Q5T1A1 773 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 C9orf135Q5VTT2 229 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF57Q68EA5 555 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 COX15Q7KZN9 410 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 GRINAQ7Z429 371 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM220AQ7Z4H9 259 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2L13Q8N349 312 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 EIF4E3Q8N5X7 224 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 WDSUB1Q8N9V3 476 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2M7Q8NG81 312 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR5H6Q8NGV6 325 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 NEIL2Q969S2 332 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 RERGQ96A58 199 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF501Q96CX3 271 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 JSRP1Q96MG2 331 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 EPYCQ99645 322 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 MND1Q9BWT6 205 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ARV1Q9H2C2 271 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 PPA2Q9H2U2 334 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 MFSD1Q9H3U5 465 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 FGFR1OP2Q9NVK5 253 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 RARRES3Q9UL19 164 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 RALGAPBQ86X10 1494 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 TP53BP1Q12888 1972 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 CENPXA8MT69 81 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 CDC7O00311 574 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 BHLHE40O14503 412 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 PSTPIP1O43586 416 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 SNAP91O60641 907 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 OXTP01178 125 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 HOXD4P09016 255 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZSCAN5DPP0CG00 497 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 GYG1P46976 350 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 VEGFCP49767 419 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 EFNA3P52797 238 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 SRPXP78539 464 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 CYP51A1Q16850 503 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ISXQ2M1V0 245 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF876PQ49A33 203 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 REP15Q6BDI9 236 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms