RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 FIGLAQ6QHK4 219 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 MDGA2Q7Z553 956 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 FAM219AQ8IW50 185 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 TMEM151BQ8IW70 566 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 CA13Q8N1Q1 262 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 GATSQ8NAP1 163 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 KDF1Q8NAX2 398 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 OR13C3Q8NGS6 347 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 FLVCR1-AS1Q8TAF5 88 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 VSTM2LQ96N03 204 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 TOLLIPQ9H0E2 274 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 PRR13Q9NZ81 148 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 NTN3O00634 580 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 TAAR5O14804 337 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 SFT2D2O95562 160 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 PLGP00747 810 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 KLK3P07288 261 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 GPX4P36969 197 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 RAB5CP51148 216 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 CFHR1Q03591 330 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 RAB32Q13637 225 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 GKN2Q86XP6 184 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 ANGPTL5Q86XS5 388 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 MALSU1Q96EH3 234 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 G6PC3Q9BUM1 346 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 C20orf24Q9BUV8 137 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 TREM2Q9NZC2 230 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 FLVCR1Q9Y5Y0 555 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 UNC13CQ8NB66 2214 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 A0A0A6YYC8 382 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 LOC390937A0A1W2PQ73 354 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 A0A1W2PQM1 296 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 H0YGG7 62 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 I3L1I5 382 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 HRKO00198 91 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 RIDAP52758 137 aaKnown RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 ARF3P61204 181 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 EGR4Q05215 589 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 FAM24BQ8N5W8 94 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 RNASE11Q8TAA1 199 aaKnown RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 IFI44Q8TCB0 444 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 TMEM230Q96A57 120 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 SLC22A18Q96BI1 424 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 CCNL2Q96S94 520 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 SPTBN2O15020 2390 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 TRBV23OR9-2A0A075B6M9 112 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 RHPN2P1A8MT19 583 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 OR6A2O95222 327 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 CTSEP14091 401 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 GNB3P16520 340 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 TBPP20226 339 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 CCR4P51679 360 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 DEFA6Q01524 100 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 SQSTM1Q13501 440 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 C14orf28Q4W4Y0 310 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 CLEC18BQ6UXF7 455 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 ZNF440Q8IYI8 595 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 LILRB2Q8N423 598 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 ZNF615Q8N8J6 731 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 OR4K15Q8NH41 348 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 TERB2Q8NHR7 220 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 SLC37A2Q8TED4 501 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 KTI12Q96EK9 354 aaPredicted RBP7.59□□□□□ -1.19
HPS4-206ENST00000439453 OR10C1Q96KK4 312 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 TWSG1Q9GZX9 223 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 Q9N2J8 555 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 HHLA2Q9UM44 414 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 RHBDD3Q9Y3P4 386 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 B4DGG1 531 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 OIP5O43482 229 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 SPINK2P20155 84 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 S100A2P29034 98 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 ACTR1BP42025 376 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 S100A10P60903 97 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 ROM1Q03395 351 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 TMEM268Q5VZI3 342 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 KCTD18Q6PI47 426 aaPredicted RBP7.59□□□□□ -1.19
HPS4-206ENST00000439453 LYPD6Q86Y78 171 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 RERGQ96A58 199 aaPredicted RBP7.59□□□□□ -1.19
HPS4-206ENST00000439453 C2orf50Q96LR7 162 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 SLC26A1Q9H2B4 701 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 C5orf66Q9H5L9 145 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 METTL8Q9H825 291 aaKnown RBP7.59□□□□□ -1.19
HPS4-206ENST00000439453 SPACA1Q9HBV2 294 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 NCOR2Q9Y618 2525 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 LMX1BO60663 402 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 LY86O95711 162 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 CST4P01036 141 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 ARG1P05089 322 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 PET100P0DJ07 73 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 FASLGP48023 281 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 UNC119Q13432 240 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 KIR2DS3Q14952 304 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 ANKRD55Q3KP44 614 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 DHRS13Q6UX07 377 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 TMPRSS7Q7RTY8 843 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 BCORP1Q8N888 145 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 POC1AQ8NBT0 407 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 LYPD6BQ8NI32 183 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 C8orf44Q96CB5 159 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms