RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 OR4F17Q8NGA8 305 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OR2AP1Q8NGE2 309 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OR52J3Q8NH60 311 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 FLVCR1-AS1Q8TAF5 88 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 UBA3Q8TBC4 463 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 DYNC2LI1Q8TCX1 351 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ZFP90Q8TF47 636 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 DCAKDQ8WVC6 231 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 PIGCQ92535 297 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TMBIM1Q969X1 311 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 EXOSC8Q96B26 276 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TADA1Q96BN2 335 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 DNAJC19Q96DA6 116 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SDSLQ96GA7 329 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 IP6K3Q96PC2 410 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TGM7Q96PF1 710 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OR4F4Q96R69 305 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TRIM51Q9BSJ1 452 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 COPS4Q9BT78 406 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 RBM4Q9BWF3 364 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 FRMD8P1Q9BZ68 369 aaPredicted RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 MRPL37Q9BZE1 423 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 NXF2Q9GZY0 626 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TRABDQ9H4I3 376 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ANKRD19PQ9H560 264 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 NT5MQ9NPB1 228 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 LHX9Q9NQ69 397 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 CISHQ9NSE2 258 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 IMPAD1Q9NX62 359 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TAS2R9Q9NYW1 312 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 GNG12Q9UBI6 72 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ANAPC7Q9UJX3 599 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TFR2Q9UP52 801 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 RASD1Q9Y272 281 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 U3KQ87 197 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ESPL1Q14674 2120 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 APCP25054 2843 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 A0A087X002 238 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 LOC100506127A0A0U1RQW1 187 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 A8MUA0 341 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 E5RI56 91 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 C11orf98E9PRG8 122 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 K7EQG2 157 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 DNASE2O00115 360 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TCAPO15273 167 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 PPIHO43447 177 aaKnown RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 AKR7A2O43488 359 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CHP2O43745 196 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 GPX5O75715 221 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 AHSA1O95433 338 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 IGF1P05019 195 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 KLK3P07288 261 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 H2AFZP0C0S5 128 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ACSM4P0C7M7 580 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 MYL2P10916 166 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 FOLR2P14207 255 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF250P15622 560 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CD36P16671 472 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 XRCC1P18887 633 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 GALP22466 123 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 UQCRC2P22695 453 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ATP5A1P25705 553 aaKnown RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CCR7P32248 378 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 RFC3P40938 356 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CRATP43155 626 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ERFP50548 548 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 PKNOX1P55347 436 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 RAG2P55895 527 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 PSME3P61289 254 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 PSPHP78330 225 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TLE4Q04727 773 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 BTN1A1Q13410 526 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 AQP6Q13520 282 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 EIF4EBP2Q13542 120 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TFDP2Q14188 446 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 GRB7Q14451 532 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 UBE2V2Q15819 145 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CHRFAM7AQ494W8 412 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 LIPNQ5VXI9 398 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CLEC6AQ6EIG7 209 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 RPL13AP3Q6NVV1 102 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 DEGS2Q6QHC5 323 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 STAC2Q6ZMT1 411 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 GDPD3Q7L5L3 318 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 BHLHA9Q7RTU4 235 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 HSD17B13Q7Z5P4 300 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 MOB3BQ86TA1 216 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 MRPL52Q86TS9 123 aaKnown RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 BIVMQ86UB2 503 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TPRA1Q86W33 373 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 IFNEQ86WN2 208 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CPNE9Q8IYJ1 553 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 SPAG16Q8N0X2 631 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 STPG2Q8N412 459 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF321PQ8N8H1 164 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 WDSUB1Q8N9V3 476 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ZSCAN4Q8NAM6 433 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 FDCSPQ8NFU4 85 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 OR2L5Q8NG80 312 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms