RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 Q8WTZ3 238 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CD84Q9UIB8 345 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 PILRAQ9UKJ1 303 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 B9D1Q9UPM9 204 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SLC5A6Q9Y289 635 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CLDN16Q9Y5I7 305 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 MMP24Q9Y5R2 645 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 FEZF1A0PJY2 475 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 M0QYG6 137 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CDC14BO60729 498 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 GPR75O95800 540 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 ZNF28P17035 718 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 FGF7P21781 194 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 AKR1C3P42330 323 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SNRPNP63162 240 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 GFI1BQ5VTD9 330 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 LILRA6Q6PI73 481 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SLC22A25Q6T423 547 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 MAML2Q8IZL2 1156 aaPredicted RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 ADAD2Q8NCV1 583 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 INTS14Q96SY0 518 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 OR2S2Q9NQN1 319 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 PRODH2Q9UF12 536 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 LOC100509620A0A075B734 347 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 A0A1W2PPE2 198 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 KCNAB3O43448 404 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 TSPAN15O95858 294 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 GCGP01275 180 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 IRF1P10914 325 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 PNLIPP16233 465 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SHHQ15465 462 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SLC22A6Q4U2R8 563 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 COL13A1Q5TAT6 717 aaPredicted RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 OR51F2Q8NH61 342 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 MARCH1Q8TCQ1 289 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SGIP1Q9BQI5 828 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 NIPSNAP3BQ9BS92 247 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 RSRP1Q9BUV0 290 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 ZDHHC8Q9ULC8 765 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 V9GYS6 101 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 ZNF860A6NHJ4 632 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 DLEU1O43261 78 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 GNRH1P01148 92 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 HSPB1P04792 205 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 RPL12P30050 165 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 BCL6P41182 706 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 MOGAT2Q3SYC2 334 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 C17orf99Q6UX52 265 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CLEC18BQ6UXF7 455 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 TGIF2LYQ8IUE0 185 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 PCSK9Q8NBP7 692 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 OR2L8Q8NGY9 312 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 OR14C36Q8NHC7 312 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SLC25A44Q96H78 314 aaPredicted RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 ACY3Q96HD9 319 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SCGB3A2Q96PL1 93 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 RTBDNQ9BSG5 229 aaPredicted RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 LMF2Q9BU23 707 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 RAB11FIP5Q9BXF6 653 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 LAMP5Q9UJQ1 280 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 STRAPQ9Y3F4 350 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 A0A1B0GTH9 108 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 E5RGE8 158 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 K7EPK0 472 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 LILRB3O75022 631 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 AMBPP02760 352 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CXCL1P09341 107 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 RD3LP0DJH9 198 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CPMP14384 443 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ECI1P42126 302 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 HNRNPKP61978 463 aaKnown RBP eCLIP4.55□□□□□ -1.68
RIF1-203ENST00000428287 SP3Q02447 781 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 GPR18Q14330 331 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 SSX2Q16385 188 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ANKRD55Q3KP44 614 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 TRMT12Q53H54 448 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 KCTD18Q6PI47 426 aaPredicted RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 TMEM156Q8N614 296 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ZPLD1Q8TCW7 415 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 OR2A5Q96R48 311 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PBDC1Q9BVG4 233 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 MRPL22Q9NWU5 206 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 NSG2Q9Y328 171 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 TK1P04183 234 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 NDUFB7P17568 137 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 TMEM50BP56557 158 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 MEP1BQ16820 701 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 COX18Q8N8Q8 333 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PLPP7Q8NBV4 271 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 IRF7Q92985 503 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 DDIT4LQ96D03 193 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 RBMXL1Q96E39 390 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 C11orf1Q9H5F2 150 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 WSB2Q9NYS7 404 aaPredicted RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 A0A0G2JN53 185 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 HSD17B6O14756 317 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 RAMP1O60894 148 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PMP2P02689 132 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CYBAP13498 195 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CEACAM1P13688 526 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms