RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SFRP4Q6FHJ7 346 aaPredicted RBP10.61□□□□□ -0.71
SGCE-203ENST00000425444 KCTD18Q6PI47 426 aaPredicted RBP10.61□□□□□ -0.71
SGCE-203ENST00000425444 DCDC5Q6ZRR9 648 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 PRSS45Q7RTY3 260 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 AMIGO2Q86SJ2 522 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 CSNK2A3Q8NEV1 391 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 C22orf15Q8WYQ4 148 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 LRTOMTQ8WZ04 291 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 CNN2Q99439 309 aaKnown RBP10.61□□□□□ -0.71
SGCE-203ENST00000425444 TTTY10Q9BZA0 68 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 YIPF3Q9GZM5 350 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 RGCCQ9H4X1 137 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 NIPAL2Q9H841 368 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 TRIM36Q9NQ86 728 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 CLN8Q9UBY8 286 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 ENOPH1Q9UHY7 261 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 KLHDC2Q9Y2U9 406 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 POLR3KQ9Y2Y1 108 aaPredicted RBP10.61□□□□□ -0.71
SGCE-203ENST00000425444 LRP12Q9Y561 859 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 INSIG2Q9Y5U4 225 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 CCDC182A6NF36 153 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 ANXA2P2A6NMY6 339 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 M0R129 80 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 LGALS8O00214 317 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 PSMD9O00233 223 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 PRKYO43930 277 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 MITFO75030 526 aaPredicted RBP10.6□□□□□ -0.71
SGCE-203ENST00000425444 FSTL3O95633 263 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
SGCE-203ENST00000425444 FPR2P25090 351 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 HCCSP53701 268 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 IL13RA1P78552 427 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 HOXA4Q00056 320 aaPredicted RBP10.6□□□□□ -0.71
SGCE-203ENST00000425444 RBMS3Q6XE24 437 aaKnown RBP10.6□□□□□ -0.71
SGCE-203ENST00000425444 ZNF826PQ6ZT77 177 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 COMMD2Q86X83 199 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 TECTBQ96PL2 329 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 DUX5Q96PT3 197 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 TEAD3Q99594 435 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 MICU1Q9BPX6 476 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 GABARAPL1Q9H0R8 117 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 SLITRK2Q9H156 845 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 SEMA6AQ9H2E6 1030 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 H2AFY2Q9P0M6 372 aaPredicted RBP10.6□□□□□ -0.71
SGCE-203ENST00000425444 TMEM14AQ9Y6G1 99 aa10.6□□□□□ -0.71
SGCE-203ENST00000425444 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 IGHV2-70DA0A0C4DH43 119 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 SLC22A31A6NKX4 558 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 PHYHO14832 338 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 ALOX5APP20292 161 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 IL5RAQ01344 420 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 SLX4IPQ5VYV7 408 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 KDM4DQ6B0I6 523 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 LYPD2Q6UXB3 125 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 KCTD8Q6ZWB6 473 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 TCEANCQ8N8B7 351 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 OR8B12Q8NGG6 310 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 FAM81AQ8TBF8 368 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 NUDT16L1Q9BRJ7 211 aaKnown RBP10.59□□□□□ -0.71
SGCE-203ENST00000425444 MROQ9BYG7 248 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.59□□□□□ -0.71
SGCE-203ENST00000425444 ZNF319Q9P2F9 582 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 ERVK-18Q9QC07 812 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 ZNF391Q9UJN7 358 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 IKZF2Q9UKS7 526 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 NUP50Q9UKX7 468 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 GTF2A1LQ9UNN4 478 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 RHBDD3Q9Y3P4 386 aa10.59□□□□□ -0.71
SGCE-203ENST00000425444 ARHGAP32A7KAX9 2087 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 ZAR1LA6NP61 321 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 ADAM20O43506 726 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 FSHBP01225 129 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 GYPAP02724 150 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 PRTN3P24158 256 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 RIDAP52758 137 aaKnown RBP10.58□□□□□ -0.72
SGCE-203ENST00000425444 CSNK2BP67870 215 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 PRDX4Q13162 271 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 ZNF829Q3KNS6 432 aaPredicted RBP10.58□□□□□ -0.72
SGCE-203ENST00000425444 WDR25Q64LD2 544 aaPredicted RBP10.58□□□□□ -0.72
SGCE-203ENST00000425444 CCDC121Q6ZUS5 278 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 MEPCEQ7L2J0 689 aaKnown RBP10.58□□□□□ -0.72
SGCE-203ENST00000425444 BCDIN3DQ7Z5W3 292 aaKnown RBP10.58□□□□□ -0.72
SGCE-203ENST00000425444 C1QL4Q86Z23 238 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 GID4Q8IVV7 300 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 SLC35F2Q8IXU6 374 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 GCSAMQ8N6F7 178 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 OR1M1Q8NGA1 313 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 TMEM163Q8TC26 289 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 LRRC29Q8WV35 223 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 RAB40AQ8WXH6 277 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 ASB17Q8WXJ9 295 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 DUS3LQ96G46 650 aaKnown RBP10.58□□□□□ -0.72
SGCE-203ENST00000425444 IL4I1Q96RQ9 567 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 CIB1Q99828 191 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 RTL8AQ9BWD3 113 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 RIBC2Q9H4K1 309 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 ABCB9Q9NP78 766 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 OAZ3Q9UMX2 235 aa10.58□□□□□ -0.72
SGCE-203ENST00000425444 COPS3Q9UNS2 423 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms