RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 FAM32AQ9Y421 112 aaKnown RBP10.51□□□□□ -0.73
LINC00339-203ENST00000420503 CDIPTO14735 213 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 TBX1O43435 398 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 NDUFA2O43678 99 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 ECDO95905 644 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-203ENST00000420503 SEMG1P04279 462 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 NOS3P29474 1203 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 MSX2P35548 267 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-203ENST00000420503 TGFBR2P37173 567 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 TGM4P49221 684 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 NUDT2P50583 147 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 ERVFRD-1P60508 538 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 FAM3AP98173 230 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 HABP2Q14520 560 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-203ENST00000420503 STUMQ69YW2 141 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 METAP1DQ6UB28 335 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-203ENST00000420503 ARPINQ7Z6K5 226 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 ZDHHC21Q8IVQ6 265 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 PLPP7Q8NBV4 271 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 CCDC197Q8NCU1 140 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 PROKR2Q8NFJ6 384 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 BCAS4Q8TDM0 211 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 LRTOMTQ8WZ04 291 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 RPL3LQ92901 407 aaKnown RBP10.5□□□□□ -0.73
LINC00339-203ENST00000420503 SPTSSAQ969W0 71 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 SLAMF6Q96DU3 332 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 GAFA1Q96PS6 74 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 AMELYQ99218 206 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 EFCAB1Q9HAE3 211 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 ZNF391Q9UJN7 358 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 RHBDD3Q9Y3P4 386 aa10.5□□□□□ -0.73
LINC00339-203ENST00000420503 hCG_38984A0A1B0GV85 526 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 BTBD17A6NE02 478 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 ZNF823P16415 610 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 GSSP48637 474 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 MICBQ29980 383 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 GFOD2Q3B7J2 385 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 DMRTC1Q5HYR2 192 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 GLYATQ6IB77 296 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 PGBD2Q6P3X8 592 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 DRAM2Q6UX65 266 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 DPY19L4Q7Z388 723 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 SLC37A3Q8NCC5 494 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 OR9Q2Q8NGE9 314 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 OR8S1Q8NH09 359 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 MRAPQ8TCY5 172 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 CFHR4Q92496 578 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 SPSB4Q96A44 273 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 SGK3Q96BR1 496 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 DCAF13Q9NV06 445 aaKnown RBP10.49□□□□□ -0.73
LINC00339-203ENST00000420503 ARL8BQ9NVJ2 186 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 DNAJC27Q9NZQ0 273 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 ABCD2Q9UBJ2 740 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 FBLN5Q9UBX5 448 aa10.49□□□□□ -0.73
LINC00339-203ENST00000420503 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-203ENST00000420503 NDUFAB1O14561 156 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 GPR37O15354 613 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 AKR7A2O43488 359 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 NDUFB3O43676 98 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 GADD45GO95257 159 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 PAHP00439 452 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 VSIG10L2P0DP72 767 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 CX3CR1P49238 355 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 PSME3P61289 254 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 MXRA7P84157 204 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 KRT72Q14CN4 511 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 NSUN5P1Q3KNT7 163 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 ZBTB37Q5TC79 503 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 CRIP3Q6Q6R5 217 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 Q6ZTK2 550 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 PRSS45Q7RTY3 260 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 C8orf46Q8TAG6 207 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 REEP6Q96HR9 211 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 KCNJ15Q99712 375 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 SSX3Q99909 188 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 HOPXQ9BPY8 73 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-203ENST00000420503 PAPOLGQ9BWT3 736 aaKnown RBP10.48□□□□□ -0.73
LINC00339-203ENST00000420503 RNPEPL1Q9HAU8 725 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 BRD7Q9NPI1 651 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 TRIM36Q9NQ86 728 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 C14orf119Q9NWQ9 140 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-203ENST00000420503 TAS2R1Q9NYW7 299 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 TAGLN3Q9UI15 199 aa10.48□□□□□ -0.73
LINC00339-203ENST00000420503 NOP16Q9Y3C1 178 aaKnown RBP10.48□□□□□ -0.73
LINC00339-203ENST00000420503 DHRS12A0PJE2 317 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 ANKRD30BLA7E2S9 258 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 ZNF593O00488 134 aaPredicted RBP10.47□□□□□ -0.73
LINC00339-203ENST00000420503 ANXA2P07355 339 aaKnown RBP10.47□□□□□ -0.73
LINC00339-203ENST00000420503 CD28P10747 220 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
LINC00339-203ENST00000420503 EEF1B2P24534 225 aaKnown RBP10.47□□□□□ -0.73
LINC00339-203ENST00000420503 ACKR3P25106 362 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 RRM2P31350 389 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 BMXP51813 675 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 PPP1R8Q12972 351 aaKnown RBP10.47□□□□□ -0.73
LINC00339-203ENST00000420503 CRMP1Q14194 572 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 TAF13Q15543 124 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 FAM57BQ71RH2 274 aa10.47□□□□□ -0.73
LINC00339-203ENST00000420503 SLC36A1Q7Z2H8 476 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms