RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PELI1Q96FA3 418 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 ALG8Q9BVK2 526 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 TMEM106BQ9NUM4 274 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 GNG8Q9UK08 70 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 SLC22A13Q9Y226 551 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 RHBDD3Q9Y3P4 386 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 WIPI2Q9Y4P8 454 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 LOC100289279A0A1B0GTE1 492 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 DHRS7CA6NNS2 312 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 ANKRD30BLA7E2S9 258 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 IFNL4K9M1U5 179 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 DHRS3O75911 302 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 RPP14O95059 124 aaKnown RBP15.72■□□□□ 0.11
PTCD3-204ENST00000418628 LY6G6DO95868 133 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 PIPP12273 146 aaPredicted RBP15.72■□□□□ 0.11
PTCD3-204ENST00000418628 PMELP40967 661 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 SLC3A1Q07837 685 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 THAP5Q7Z6K1 395 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 WDR86Q86TI4 376 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 SPERTQ8NA61 448 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 CCL17Q92583 94 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 HPS1Q92902 700 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 ERGIC1Q969X5 290 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 VCX3BQ9H321 246 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 PPP1R3EQ9H7J1 279 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 PLCXD1Q9NUJ7 323 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 DIMT1Q9UNQ2 313 aaKnown RBP15.72■□□□□ 0.11
PTCD3-204ENST00000418628 PPP1R3CQ9UQK1 317 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 V9GYS6 101 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 C2CD3Q4AC94 2353 aa15.72■□□□□ 0.11
PTCD3-204ENST00000418628 DSCAML1Q8TD84 2053 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 PPIHO43447 177 aaKnown RBP15.71■□□□□ 0.11
PTCD3-204ENST00000418628 FSTL3O95633 263 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 IGHV2-70P01814 119 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 IGHV4-31P0DP07 118 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 DCKP27707 260 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 IL2RGP31785 369 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 RBMXP38159 391 aaKnown RBP15.71■□□□□ 0.11
PTCD3-204ENST00000418628 MAP2K3P46734 347 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 CHN2P52757 468 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 NANOS3P60323 173 aaKnown RBP15.71■□□□□ 0.11
PTCD3-204ENST00000418628 C6orf52Q5T4I8 152 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 TMEM42Q69YG0 159 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 LHFPL3Q86UP9 236 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 FTMTQ8N4E7 242 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 OR14K1Q8NGZ2 314 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 OR2G2Q8NGZ5 317 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 CLDND2Q8NHS1 167 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 HPSE2Q8WWQ2 592 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 C4orf36Q96KX1 117 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 PAPOLGQ9BWT3 736 aaKnown RBP15.71■□□□□ 0.11
PTCD3-204ENST00000418628 ANKRD60Q9BZ19 345 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 FGF23Q9GZV9 251 aaPredicted RBP15.71■□□□□ 0.11
PTCD3-204ENST00000418628 TLNRD1Q9H1K6 362 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 ABCB9Q9NP78 766 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 FKBP14Q9NWM8 211 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 TREM2Q9NZC2 230 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 RRP15Q9Y3B9 282 aaKnown RBP15.71■□□□□ 0.11
PTCD3-204ENST00000418628 MPC1Q9Y5U8 109 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 NAV3Q8IVL0 2385 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 ZFHX3Q15911 3703 aa15.71■□□□□ 0.11
PTCD3-204ENST00000418628 ZNF816-ZNF321PA0A0X1KG74 233 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 IRGMA1A4Y4 181 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 LRP5LA4QPB2 252 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 TMEM178BH3BS89 294 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 CD5LO43866 347 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 PSMB10P40306 273 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 CCR9P51686 369 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 MPPED2Q15777 294 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 PRAMEF6Q5VXH4 476 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 CLEC9AQ6UXN8 241 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 MOGAT3Q86VF5 341 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 ZNF420Q8TAQ5 688 aaPredicted RBP15.7■□□□□ 0.1
PTCD3-204ENST00000418628 RPS4Y2Q8TD47 263 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 ISG20L2Q9H9L3 353 aaKnown RBP15.7■□□□□ 0.1
PTCD3-204ENST00000418628 CNOT2Q9NZN8 540 aaKnown RBP15.7■□□□□ 0.1
PTCD3-204ENST00000418628 NPTNQ9Y639 398 aa15.7■□□□□ 0.1
PTCD3-204ENST00000418628 NIPBLQ6KC79 2804 aaeCLIP15.69■□□□□ 0.1
PTCD3-204ENST00000418628 P2RY10O00398 339 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 ISG15P05161 165 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 UBCP0CG48 685 aaKnown RBP15.69■□□□□ 0.1
PTCD3-204ENST00000418628 MYF6P23409 242 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 LMO4P61968 165 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 PRDX4Q13162 271 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 FAM76BQ5HYJ3 339 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 AVPI1Q5T686 147 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 IZUMO2Q6UXV1 221 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 DOK3Q7L591 496 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 C11orf53Q8IXP5 236 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 ZNF485Q8NCK3 441 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 SEMA6DQ8NFY4 1073 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 OR5P3Q8WZ94 311 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 GGHQ92820 318 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 MRPL48Q96GC5 212 aaKnown RBP15.69■□□□□ 0.1
PTCD3-204ENST00000418628 FAM71F1Q96KD3 344 aaPredicted RBP15.69■□□□□ 0.1
PTCD3-204ENST00000418628 MYCBPQ99417 103 aaPredicted RBP15.69■□□□□ 0.1
PTCD3-204ENST00000418628 FRRS1LQ9P0K9 344 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 PSORS1C1Q9UIG5 152 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 GTF2A1LQ9UNN4 478 aa15.69■□□□□ 0.1
PTCD3-204ENST00000418628 NF1P21359 2839 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms