RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PNPLA2Q96AD5 504 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RAD51AP1Q96B01 352 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TM4SF18Q96CE8 201 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CNRIP1Q96F85 164 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 S100A16Q96FQ6 103 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 WBP1Q96G27 269 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RBM18Q96H35 190 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 C12orf66Q96MD2 445 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 LINC00052Q96N35 136 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SMIM14Q96QK8 99 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 VGLL1Q99990 258 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 AIF1LQ9BQI0 150 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SEC22CQ9BRL7 303 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OVOL2Q9BRP0 275 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TCEAL7Q9BRU2 100 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ZNF649Q9BS31 505 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ATG101Q9BSB4 218 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PDCD10Q9BUL8 212 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TM6SF2Q9BZW4 377 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 EGLN1Q9GZT9 426 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ARL6Q9H0F7 186 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SLITRK2Q9H156 845 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ALX4Q9H161 411 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 ABCG8Q9H221 673 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR51I1Q9H343 314 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 DPEP2Q9H4A9 486 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 C5orf66Q9H5L9 145 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RERGLQ9H628 205 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 METTL17Q9H7H0 456 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 NOX3Q9HBY0 568 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 HRASLSQ9HDD0 168 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 BIN3Q9NQY0 253 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CTPS2Q9NRF8 586 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CMC2Q9NRP2 79 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 HPF1Q9NWY4 346 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PURGQ9UJV8 347 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 COPS3Q9UNS2 423 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PLCL2Q9UPR0 1127 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RASD1Q9Y272 281 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 HS3ST2Q9Y278 367 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CA5BQ9Y2D0 317 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 YARS2Q9Y2Z4 477 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 SLC6A5Q9Y345 797 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PCDHGA1Q9Y5H4 931 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ETV7Q9Y603 341 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 NINQ8N4C6 2090 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 DENND4CQ5VZ89 1909 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SPTBN5Q9NRC6 3674 aaKnown RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 CASP8AP2Q9UKL3 1982 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 EYSQ5T1H1 3165 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 hCG_38984A0A1B0GV85 526 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 C2orf92A0A1B0GVN3 265 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 KANTRA0A1W2PQU2 76 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 ANTXRLA6NF34 631 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 NKX6-3A6NJ46 265 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 ACOD1A6NK06 481 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 ZNF98A6NK75 572 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 RFPL4AA6NLU0 287 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 OR2AG2A6NM03 316 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 RIIAD1A6NNX1 92 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 KRTAP16-1A8MUX0 517 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 F5H5P2 479 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 RFPL4AL1F8VTS6 287 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 F8W036 122 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 NPIPB9F8W1W9 429 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 G3V3Q6 166 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 K7EQD1 137 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 DNASE2O00115 360 aaPredicted RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 SULT1C2O00338 296 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 RTCAO00442 366 aaKnown RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 PLPP1O14494 284 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 BHLHE40O14503 412 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 SOCS3O14543 225 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 PRRG1O14668 218 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 ARPC1BO15143 372 aaKnown RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 ADAM12O43184 909 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 EMC8O43402 210 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 LANCL1O43813 399 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 VEGFDO43915 354 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 POP7O75817 140 aaKnown RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 TOXO94900 526 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 OR2F2O95006 317 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 SNAPINO95295 136 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 GJB5O95377 273 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 OLFM2O95897 454 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 TBX6O95947 436 aaPredicted RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 AK1P00568 194 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 CFDP00746 253 aaPredicted RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 APOC3P02656 99 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 MT-ND4P03905 459 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 S100A8P05109 93 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 S100A9P06702 114 aaKnown RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 S100A6P06703 90 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 MELTFP08582 738 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 IGFBP1P08833 259 aaPredicted RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 CD3GP09693 182 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 IFI6P09912 130 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 SBK2P0C263 348 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 SMIM6P0DI80 62 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 ERGP11308 486 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms