RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SPESP1Q6UW49 350 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 QSOX2Q6ZRP7 698 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 GRINAQ7Z429 371 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF547Q8IVP9 402 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 FOXRED2Q8IWF2 684 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 KIR2DL5AQ8N109 375 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 BHLHE23Q8NDY6 225 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM71CQ8NEG0 241 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 BPIFCQ8NFQ6 507 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 OR9Q2Q8NGE9 314 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 OR2G2Q8NGZ5 317 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM174Q8WUU8 243 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 EXT2Q93063 718 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 TAAR8Q969N4 342 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 ADGRG7Q96K78 797 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 STACQ99469 402 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 NIPSNAP1Q9BPW8 284 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 TAPBPLQ9BX59 468 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 WWTR1Q9GZV5 400 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 UBQLN3Q9H347 655 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 SRMSQ9H3Y6 488 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 ANKRA2Q9H9E1 313 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC2A9Q9NRM0 540 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 MAN2C1Q9NTJ4 1040 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 IKZF3Q9UKT9 509 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 EMCNQ9ULC0 261 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 LIPGQ9Y5X9 500 aa4.78□□□□□ -1.64
ECHDC1-206ENST00000417628 DOCK4Q8N1I0 1966 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 IGLV3-12A0A075B6K2 115 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ANXA2P2A6NMY6 339 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SERPINE3A8MV23 424 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 MCRIP1C9JLW8 97 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 GPR31O00270 319 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 NME4O00746 187 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 WBP4O75554 376 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 OR2A4O95047 310 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 NXPH3O95157 252 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SLC25A14O95258 325 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 TOMM40O96008 361 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 IGF2P01344 180 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 IGHG3P01860 377 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 CSF1P09603 554 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SPTBP11277 2137 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PIPP12273 146 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 MGMTP16455 207 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF20P17024 532 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 HLA-GP17693 338 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 C21orf33P30042 268 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SSTR1P30872 391 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 TIMP3P35625 211 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PSMB10P40306 273 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 KHKP50053 298 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 RPL14P50914 215 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 CCR8P51685 355 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 DSCR9P59020 149 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 TAS2R50P59544 299 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 HILS1P60008 231 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ERVS71-1P61550 626 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 LSM3P62310 102 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PPIAP62937 165 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PLGLB1Q02325 96 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 TMEM115Q12893 351 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SKP2Q13309 424 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 RUNX2Q13950 521 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 IL18Q14116 193 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 GAMTQ14353 236 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF345Q14585 488 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 MAD2L1BPQ15013 274 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 JOSD1Q15040 202 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 RSU1Q15404 277 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ADIPOQQ15848 244 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 RAB11BQ15907 218 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 TMEM241Q24JQ0 296 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 EXOC3L2Q2M3D2 409 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF628Q5EBL2 1059 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PRAMEF8Q5VWM4 474 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PRAMEF7Q5VXH5 474 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 AADACL2Q6P093 401 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PET117Q6UWS5 81 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 FAM131AQ6UXB0 335 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 GSG1LQ6UXU4 331 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 LANCL3Q6ZV70 420 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 CBLN2Q8IUK8 224 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 TRAPPC5Q8IUR0 188 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 UBAC2Q8NBM4 344 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 OR8U1Q8NH10 309 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PIGXQ8TBF5 258 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 RNASE8Q8TDE3 154 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SMAP2Q8WU79 429 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ORAOV1Q8WV07 137 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 RXFP2Q8WXD0 754 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 RGP1Q92546 391 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 MSI2Q96DH6 328 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PACRGQ96M98 296 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 C12orf66Q96MD2 445 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 OR2A7Q96R45 310 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 URM1Q9BTM9 101 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 THUMPD3Q9BV44 507 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms