RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PRR23D2P0DMB1 279 aaPredicted RBP12.51□□□□□ -0.41
UBXN4-203ENST00000416538 AMY2BP19961 511 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 CFHR2P36980 270 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 HCCSP53701 268 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 PSMA6P60900 246 aaKnown RBP12.51□□□□□ -0.41
UBXN4-203ENST00000416538 BAMBIQ13145 260 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 TEX36Q5VZQ5 186 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 SHFQ7M4L6 423 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 SPATA24Q86W54 205 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 C3orf56Q8N813 242 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 OR1M1Q8NGA1 313 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 OR8B12Q8NGG6 310 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 HPSE2Q8WWQ2 592 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
UBXN4-203ENST00000416538 PCDHGB1Q9Y5G3 927 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 ANKRD30BLA7E2S9 258 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 GNGT2O14610 69 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 GYG2O15488 501 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 PRODHO43272 600 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 TFF1P04155 84 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 H2BFMP0C1H6 154 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 SELLP14151 372 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 PAICSP22234 425 aaKnown RBP12.5□□□□□ -0.41
UBXN4-203ENST00000416538 DDOSTP39656 456 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 DNAL1Q4LDG9 190 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
UBXN4-203ENST00000416538 SPERTQ8NA61 448 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 OR52H1Q8NGJ2 320 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 OR8S1Q8NH09 359 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 BCAS4Q8TDM0 211 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 PGAM5Q96HS1 289 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 TTTY10Q9BZA0 68 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 TLNRD1Q9H1K6 362 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 DNAJB9Q9UBS3 223 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 COPS3Q9UNS2 423 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
UBXN4-203ENST00000416538 TRRAPQ9Y4A5 3859 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 TRAV38-1A0A0B4J264 116 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.49□□□□□ -0.41
UBXN4-203ENST00000416538 CLDN34H7C241 214 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 PSMD9O00233 223 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 DVL1O14640 695 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 TIPRLO75663 272 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 ALOX5APP20292 161 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 EPHA2P29317 976 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 APOFQ13790 326 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 WDR38Q5JTN6 314 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 FAHD1Q6P587 224 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 RHOUQ7L0Q8 258 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 FAM216BQ8N7L0 139 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 THEM6Q8WUY1 208 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 UTP4Q969X6 686 aaKnown RBP12.49□□□□□ -0.41
UBXN4-203ENST00000416538 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 CADM1Q9BY67 442 aaKnown RBP12.49□□□□□ -0.41
UBXN4-203ENST00000416538 WDR13Q9H1Z4 485 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 OR10A2Q9H208 303 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 C14orf119Q9NWQ9 140 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 DSCAML1Q8TD84 2053 aa12.49□□□□□ -0.41
UBXN4-203ENST00000416538 SRRM5B3KS81 715 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 ZNF879B4DU55 563 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
UBXN4-203ENST00000416538 MITFO75030 526 aaPredicted RBP12.48□□□□□ -0.41
UBXN4-203ENST00000416538 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
UBXN4-203ENST00000416538 ANXA8P13928 327 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 NPY4RP50391 375 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 DAPP51397 102 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 PRDX4Q13162 271 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 DMRTC1Q5HYR2 192 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 BCDIN3DQ7Z5W3 292 aaKnown RBP12.48□□□□□ -0.41
UBXN4-203ENST00000416538 RPL3LQ92901 407 aaKnown RBP12.48□□□□□ -0.41
UBXN4-203ENST00000416538 CCL13Q99616 98 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 PRDM13Q9H4Q3 707 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
UBXN4-203ENST00000416538 RNPEPL1Q9HAU8 725 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 ERVK-18Q9QC07 812 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 KAAG1Q9UBP8 84 aa12.48□□□□□ -0.41
UBXN4-203ENST00000416538 CENPVL3A0A0U1RRI6 287 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 ZNF850A8MQ14 1090 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 CDIPTO14735 213 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 TMPRSS2O15393 492 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 PRKYO43930 277 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 DNAJC8O75937 253 aaPredicted RBP12.47□□□□□ -0.41
UBXN4-203ENST00000416538 HMGN1P05114 100 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 DCTDP32321 178 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 DLX1P56177 255 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 GMFBP60983 142 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 RPS7P62081 194 aaKnown RBP12.47□□□□□ -0.41
UBXN4-203ENST00000416538 PRB3Q04118 309 aaPredicted RBP12.47□□□□□ -0.41
UBXN4-203ENST00000416538 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
UBXN4-203ENST00000416538 KCNJ8Q15842 424 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 SLC35D3Q5M8T2 416 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 STUMQ69YW2 141 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 BTN2A1Q7KYR7 527 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 GALNT4Q8N4A0 578 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 OR5P3Q8WZ94 311 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 ST8SIA4Q92187 359 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms