RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 HCKP08631 526 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 GSTT2BP0CG30 244 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 FAHP16930 419 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 BTCP35070 178 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 RIPPLY1Q0D2K3 151 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 PLA1AQ53H76 456 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 MTFR2Q6P444 385 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 COLCA1Q6ZS62 124 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 ANGPTL5Q86XS5 388 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 OR2AE1Q8NHA4 323 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 AKAP1Q92667 903 aaKnown RBP eCLIP12.24□□□□□ -0.45
LIMS2-206ENST00000409754 GCDHQ92947 438 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-206ENST00000409754 MARVELD1Q9BSK0 173 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 ETAA1Q9NY74 926 aa12.24□□□□□ -0.45
LIMS2-206ENST00000409754 HELZ2Q9BYK8 2649 aaKnown RBP12.24□□□□□ -0.45
LIMS2-206ENST00000409754 GCN1Q92616 2671 aaKnown RBP12.24□□□□□ -0.45
LIMS2-206ENST00000409754 MEIOCA2RUB1 952 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 METTL21EPA6NDL7 271 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 CD79AP11912 226 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 PMPCAQ10713 525 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 UBE2V2Q15819 145 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 ZNF324BQ6AW86 544 aaPredicted RBP12.23□□□□□ -0.45
LIMS2-206ENST00000409754 AWAT2Q6E213 333 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 RAB12Q6IQ22 244 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 TFAP2EQ6VUC0 442 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 FAM214BQ7L5A3 538 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 OR2W3Q7Z3T1 314 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 PAQR4Q8N4S7 273 aaPredicted RBP12.23□□□□□ -0.45
LIMS2-206ENST00000409754 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
LIMS2-206ENST00000409754 BCL2L2Q92843 193 aaPredicted RBP12.23□□□□□ -0.45
LIMS2-206ENST00000409754 SPSB4Q96A44 273 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 CREB3L1Q96BA8 519 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 SNRNP40Q96DI7 357 aaKnown RBP12.23□□□□□ -0.45
LIMS2-206ENST00000409754 MRPS28Q9Y2Q9 187 aaKnown RBP12.23□□□□□ -0.45
LIMS2-206ENST00000409754 ARHGAP21Q5T5U3 1957 aa12.23□□□□□ -0.45
LIMS2-206ENST00000409754 LOC100509620A0A075B734 347 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 hCG_38984A0A1B0GV85 526 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 ZNF503-AS2A6NEH8 195 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 NAP1L6A6NFF2 107 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 TMEM14DPA8MWL7 114 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 B8ZZF3 427 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 H7C417 338 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 SULT1C2O00338 296 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 SCGNO76038 276 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 CNOT4O95628 575 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 UBBP0CG47 229 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 VSIG8P0DPA2 414 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 PTHLHP12272 177 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 ACKR3P25106 362 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 RAB1AP62820 205 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 SNTB2Q13425 540 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 UNC119Q13432 240 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 ACSF3Q4G176 576 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 RSBN1Q5VWQ0 802 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 OR2A2Q6IF42 318 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 OR10K2Q6IF99 312 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 GLIPR1L1Q6UWM5 242 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 GLCCI1Q86VQ1 547 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 CISD2Q8N5K1 135 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 PNLDC1Q8NA58 520 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 OR5M9Q8NGP3 310 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 DEDD2Q8WXF8 326 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 FAM46BQ96A09 425 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 UPRTQ96BW1 309 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 SPACA5Q96QH8 159 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 DPAGT1Q9H3H5 408 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 NOX3Q9HBY0 568 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 KLK11Q9UBX7 282 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 MTFP1Q9UDX5 166 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 ANKRD20A5PA0PJZ0 165 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 CRYABP02511 175 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 EDN3P14138 238 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 STOMP27105 288 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 PRSS3P35030 304 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 ALDH3B1P43353 468 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 OR3A4PP47883 348 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 GSK3AP49840 483 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 FAM3AP98173 230 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 SSBP1Q04837 148 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 PLP2Q04941 152 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 TNK1Q13470 666 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 SF3B4Q15427 424 aaKnown RBP eCLIP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 KISS1Q15726 138 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 C9orf106Q8NAJ2 232 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 C1orf147Q96MC9 270 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 GPER1Q99527 375 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 NUDT16L1Q9BRJ7 211 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 NEK6Q9HC98 313 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 ASF1BQ9NVP2 202 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
LIMS2-206ENST00000409754 GHRLQ9UBU3 117 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 RTTNQ86VV8 2226 aa12.22□□□□□ -0.45
LIMS2-206ENST00000409754 MYO18BQ8IUG5 2567 aa12.21□□□□□ -0.45
LIMS2-206ENST00000409754 ZNHIT1O43257 154 aa12.21□□□□□ -0.46
LIMS2-206ENST00000409754 RBBP9O75884 186 aa12.21□□□□□ -0.46
LIMS2-206ENST00000409754 TRAPPC2P0DI81 140 aa12.21□□□□□ -0.46
LIMS2-206ENST00000409754 TRAPPC2BP0DI82 140 aa12.21□□□□□ -0.46
LIMS2-206ENST00000409754 TDGF1P3P51864 188 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms