RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FBLIM1Q8WUP2 373 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 DVL3Q92997 716 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 C14orf119Q9NWQ9 140 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 ERVK13-1Q9NX77 482 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 SLC22A13Q9Y226 551 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 MPC1Q9Y5U8 109 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 DYSFO75923 2080 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 LRRC30A6NM36 301 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 WNT9BO14905 357 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 MTRF1O75570 445 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 DHRS3O75911 302 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 RIPPLY1Q0D2K3 151 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 HNRNPA0Q13151 305 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ZNF181Q2M3W8 571 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 LHFPL3Q86UP9 236 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 SYS1Q8N2H4 156 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 SEMA6DQ8NFY4 1073 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 OR8S1Q8NH09 359 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 Q8TCH9 128 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 RNF166Q96A37 237 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 FAM71F1Q96KD3 344 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ZNF649Q9BS31 505 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ALG8Q9BVK2 526 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 JAM3Q9BX67 310 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 NARFLQ9H6Q4 476 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 FGF20Q9NP95 211 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ZNF816-ZNF321PA0A0X1KG74 233 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 LOC100289279A0A1B0GTE1 492 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 A0A1B0GTI1 187 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 IRGMA1A4Y4 181 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ANXA2P2A6NMY6 339 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 TMEM178BH3BS89 294 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 CD5LO43866 347 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ATP6V1G2O95670 118 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 IGHV4-31P0DP07 118 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 DCKP27707 260 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 PMELP40967 661 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 GZMKP49863 264 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 C6orf52Q5T4I8 152 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 CYB5R2Q6BCY4 276 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 FDX2Q6P4F2 183 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 Q71RC1 249 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 THAP5Q7Z6K1 395 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 CLDND2Q8NHS1 167 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ZNF420Q8TAQ5 688 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ITPKCQ96DU7 683 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 C4orf36Q96KX1 117 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 ABCB9Q9NP78 766 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 NPTNQ9Y639 398 aa16.73■□□□□ 0.27
PDLIM2-207ENST00000409417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 ZNF850A8MQ14 1090 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 J3QLW9 94 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 ZNF19P17023 458 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 CCL1P22362 96 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 IL2RGP31785 369 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 RBMXP38159 391 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 PSMB10P40306 273 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 MPPED2Q15777 294 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 WDR38Q5JTN6 314 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 ZBTB37Q5TC79 503 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 PRAMEF6Q5VXH4 476 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 DOK3Q7L591 496 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 PRSS35Q8N3Z0 413 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 OR2G2Q8NGZ5 317 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 PELI1Q96FA3 418 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 PPP1R3EQ9H7J1 279 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 FN3KRPQ9HA64 309 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 UFSP2Q9NUQ7 469 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 PIGLQ9Y2B2 252 aa16.72■□□□□ 0.27
PDLIM2-207ENST00000409417 YLPM1P49750 1951 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 TANC2Q9HCD6 1990 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 DHRS7CA6NNS2 312 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 P2RY10O00398 339 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 LMO4P61968 165 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 BTG1P62324 171 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 PRDX4Q13162 271 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 LAIR2Q6ISS4 152 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 Q6ZSR3 168 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 C1orf87Q8N0U7 546 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 OR11L1Q8NGX0 322 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 OR5P3Q8WZ94 311 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 PIGCQ92535 297 aa16.71■□□□□ 0.27
PDLIM2-207ENST00000409417 FN1P02751 2386 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 ISPDA4D126 451 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 CYB5R3P00387 301 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 IGHV2-70P01814 119 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 LIMS3P0CW19 117 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 LIMS4P0CW20 117 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 IRF2P14316 349 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 FAHP16930 419 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 KIR3DL2P43630 455 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 ODF4Q2M2E3 257 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 LRRC28Q86X40 367 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 ZDHHC23Q8IYP9 409 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 MSI2Q96DH6 328 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 C1orf159Q96HA4 380 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 MICU1Q9BPX6 476 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 ISG20L2Q9H9L3 353 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 FRRS1LQ9P0K9 344 aa16.7■□□□□ 0.26
PDLIM2-207ENST00000409417 ENPP5Q9UJA9 477 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms