RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CES1P1Q9UKY3 287 aa1.55□□□□□ -2.16
CD47-203ENST00000398258 S4R3C0 116 aa1.55□□□□□ -2.16
CD47-203ENST00000398258 JCADQ9P266 1359 aa1.55□□□□□ -2.16
CD47-203ENST00000398258 DOCK9Q9BZ29 2069 aa1.55□□□□□ -2.16
CD47-203ENST00000398258 CABIN1Q9Y6J0 2220 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 COLCA2A8K830 154 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 CHMP2AO43633 222 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 EIF1BO60739 113 aaKnown RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 UPK1BO75841 260 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 ETHE1O95571 254 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 PTHP01270 115 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 IGLV2-8P01709 118 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 MT-ND4P03905 459 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 TCP1P17987 556 aaKnown RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 ME2P23368 584 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 TALDO1P37837 337 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 EIF1P41567 113 aaKnown RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 TAS2R46P59540 309 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 IFITM3Q01628 133 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 HNRNPA1L2Q32P51 320 aaKnown RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 SLC25A35Q3KQZ1 300 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 COX19Q49B96 90 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 TEX30Q5JUR7 227 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 MLIPQ5VWP3 458 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 MFSD14CQ5VZR4 134 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 TMEM236Q5W0B7 351 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 KDM4DQ6B0I6 523 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 OR2T5Q6IEZ7 315 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 GUSBP11Q6P575 273 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 ZNF880Q6PDB4 577 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 UNQ9165/PRO28630Q6UXU0 137 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 OSR2Q8N2R0 312 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 TMEM256Q8N2U0 113 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 SLC35G3Q8N808 338 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 WDR31Q8NA23 367 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 TTLQ8NG68 377 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 OR51L1Q8NGJ5 315 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 OR1J4Q8NGS1 313 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 OR2T29Q8NH02 315 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 ENKURQ8TC29 256 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 TCP10LQ8TDR4 215 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 RXFP4Q8TDU9 374 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 ZNF75CPQ92670 426 aaPredicted RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 TFGQ92734 400 aaPredicted RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 L3HYPDHQ96EM0 354 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 OR4K3Q96R72 315 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 KCNS3Q9BQ31 491 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 SULT4A1Q9BR01 284 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 SFXN3Q9BWM7 321 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 OSBPL11Q9BXB4 747 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 GAL3ST2Q9H3Q3 398 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 ARMC7Q9H6L4 198 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 WFDC1Q9HC57 220 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 RBFOX1Q9NWB1 397 aaKnown RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 RHBDL2Q9NX52 303 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 ZMAT5Q9UDW3 170 aaKnown RBP1.54□□□□□ -2.16
CD47-203ENST00000398258 VAX2Q9UIW0 290 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 SIGLEC7Q9Y286 467 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 KLF12Q9Y4X4 402 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 HES2Q9Y543 173 aa1.54□□□□□ -2.16
CD47-203ENST00000398258 AQRO60306 1485 aaKnown RBP eCLIP1.54□□□□□ -2.16
CD47-203ENST00000398258 TRAV40A0A0B4J280 105 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 IGHV2OR16-5A0A0B4J2B6 119 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 CCL15-CCL14A0A0B4J2E2 113 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 ZNF850A8MQ14 1090 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 GATCO43716 136 aaKnown RBP1.53□□□□□ -2.16
CD47-203ENST00000398258 SLC19A2O60779 497 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 FOXH1O75593 365 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 SERPINB7O75635 380 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 TRAPPC6AO75865 159 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 RCBTB2O95199 551 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 TTC4O95801 387 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 TGM6O95932 706 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 IL1RNP18510 177 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 NPY1RP25929 384 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 GNRHRP30968 328 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 GGT2P36268 569 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 ERFP50548 548 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 RAB7AP51149 207 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 SLC35B1P78383 322 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 CYP24A1Q07973 514 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 ZNF616Q08AN1 781 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 CCL15Q16663 113 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 KRTAP13-2Q52LG2 175 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 DRAM1Q8N682 238 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 ST20-AS1Q8NBB2 130 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 TMEM104Q8NE00 496 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 OR9A2Q8NGT5 310 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 OR6K6Q8NGW6 343 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 SYNPRQ8TBG9 265 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 DCAKDQ8WVC6 231 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 TMEM234Q8WY98 164 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 KIAA1143Q96AT1 154 aaPredicted RBP1.53□□□□□ -2.16
CD47-203ENST00000398258 RBMXL1Q96E39 390 aaKnown RBP1.53□□□□□ -2.16
CD47-203ENST00000398258 TBL1YQ9BQ87 522 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 TIMM29Q9BSF4 260 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 FBXO8Q9NRD0 319 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 HEBP1Q9NRV9 189 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 CBY1Q9Y3M2 126 aa1.53□□□□□ -2.16
CD47-203ENST00000398258 SIGLEC1Q9BZZ2 1709 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms