RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 DUX4L9Q6RFH8 374 aaPredicted RBP15.18■□□□□ 0.02
FXN-203ENST00000396366 C9orf139Q6ZV77 190 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 RHOUQ7L0Q8 258 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 OR52H1Q8NGJ2 320 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 LRRC29Q8WV35 223 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 LYZL4Q96KX0 146 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 PCGF1Q9BSM1 259 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 SP140LQ9H930 580 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 DUX4Q9UBX2 424 aa15.18■□□□□ 0.02
FXN-203ENST00000396366 GSC2O15499 205 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 PRODHO43272 600 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 ENSAO43768 121 aaKnown RBP15.17■□□□□ 0.02
FXN-203ENST00000396366 TIPRLO75663 272 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 HKR1P10072 659 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 NPY4RP50391 375 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 RPS7P62081 194 aaKnown RBP15.17■□□□□ 0.02
FXN-203ENST00000396366 MZT1Q08AG7 82 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 APOFQ13790 326 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 KCNJ8Q15842 424 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 TEX36Q5VZQ5 186 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 RUSC1-AS1Q66K80 236 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 WDR82Q6UXN9 313 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 ZNF454Q8N9F8 522 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 CCL13Q99616 98 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 PAPOLGQ9BWT3 736 aaKnown RBP15.17■□□□□ 0.02
FXN-203ENST00000396366 CADM1Q9BY67 442 aaKnown RBP15.17■□□□□ 0.02
FXN-203ENST00000396366 FGF23Q9GZV9 251 aaPredicted RBP15.17■□□□□ 0.02
FXN-203ENST00000396366 SLC25A19Q9HC21 320 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 TVP23BQ9NYZ1 205 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 PCDHGB1Q9Y5G3 927 aa15.17■□□□□ 0.02
FXN-203ENST00000396366 PKD1L1Q8TDX9 2849 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 ZNF850A8MQ14 1090 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 ZNF879B4DU55 563 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.16■□□□□ 0.02
FXN-203ENST00000396366 PSMD9O00233 223 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 DVL1O14640 695 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 CDIPTO14735 213 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 RNASE1P07998 156 aaKnown RBP15.16■□□□□ 0.02
FXN-203ENST00000396366 MRPL3P09001 348 aaKnown RBP15.16■□□□□ 0.02
FXN-203ENST00000396366 ALOX5APP20292 161 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 CFHR2P36980 270 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 MTNR1AP48039 350 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 DAPP51397 102 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 SNAPC1Q16533 368 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 DEFB112Q30KQ8 113 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 CD276Q5ZPR3 534 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 OR8B12Q8NGG6 310 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 UTP4Q969X6 686 aaKnown RBP15.16■□□□□ 0.02
FXN-203ENST00000396366 ITPKCQ96DU7 683 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 TBX15Q96SF7 602 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 YY1AP1Q9H869 796 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 LRP12Q9Y561 859 aa15.16■□□□□ 0.02
FXN-203ENST00000396366 CCDC182A6NF36 153 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 PRR32B1ATL7 298 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 TMPRSS2O15393 492 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 NDUFA2O43678 99 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 TOX4O94842 621 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 TFF1P04155 84 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 MMP9P14780 707 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 CFL1P23528 166 aaKnown RBP15.15■□□□□ 0.02
FXN-203ENST00000396366 GNALP38405 381 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 CRISP1P54107 249 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 GMFBP60983 142 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 PRDX4Q13162 271 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 SLC35D3Q5M8T2 416 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 BTN2A1Q7KYR7 527 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 BCDIN3DQ7Z5W3 292 aaKnown RBP15.15■□□□□ 0.02
FXN-203ENST00000396366 CSNK2A3Q8NEV1 391 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 OR5T2Q8NGG2 359 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 PIGCQ92535 297 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 RPL3LQ92901 407 aaKnown RBP15.15■□□□□ 0.02
FXN-203ENST00000396366 TEAD3Q99594 435 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 RNPEPL1Q9HAU8 725 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 TRIM36Q9NQ86 728 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 PAPOLBQ9NRJ5 636 aaKnown RBP15.15■□□□□ 0.02
FXN-203ENST00000396366 TNFRSF19Q9NS68 423 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 LAMP5Q9UJQ1 280 aa15.15■□□□□ 0.02
FXN-203ENST00000396366 CENPVL3A0A0U1RRI6 287 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 M0R129 80 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 HOXA3O43365 443 aaPredicted RBP15.14■□□□□ 0.01
FXN-203ENST00000396366 MITFO75030 526 aaPredicted RBP15.14■□□□□ 0.01
FXN-203ENST00000396366 HOXB6P17509 224 aaKnown RBP15.14■□□□□ 0.01
FXN-203ENST00000396366 AMY2BP19961 511 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 ARF6P62330 175 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 PTGES3Q15185 160 aaKnown RBP15.14■□□□□ 0.01
FXN-203ENST00000396366 DMRTC1Q5HYR2 192 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 WDR38Q5JTN6 314 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 FAHD1Q6P587 224 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 KRT77Q7Z794 578 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 GALNT4Q8N4A0 578 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 FAM216BQ8N7L0 139 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 OR5P3Q8WZ94 311 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 ST8SIA4Q92187 359 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 PPP1R14AQ96A00 147 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 SLC25A28Q96A46 364 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 WDFY2Q96P53 400 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 MICU1Q9BPX6 476 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 TTTY10Q9BZA0 68 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 TLNRD1Q9H1K6 362 aa15.14■□□□□ 0.01
FXN-203ENST00000396366 WDR13Q9H1Z4 485 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms