RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ODF4Q2M2E3 257 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 MST1LQ2TV78 715 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 KRBOX4Q5JUW0 171 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TMEM69Q5SWH9 247 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 THEM4Q5T1C6 240 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 DCAF12Q5T6F0 453 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 RIPPLY2Q5TAB7 128 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 LPCAT3Q6P1A2 487 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 PAPD4Q6PIY7 484 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 MEX3BQ6ZN04 569 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 H1FNTQ75WM6 255 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 FCRLAQ7L513 359 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SLC35F2Q8IXU6 374 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SDR9C7Q8NEX9 313 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR10H4Q8NGA5 316 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR5M8Q8NGP6 311 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 RNF128Q8TEB7 428 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TNFAIP8L1Q8WVP5 186 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TCTEX1D2Q8WW35 142 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 METTL21AQ8WXB1 218 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 CPNE4Q96A23 557 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 MALSU1Q96EH3 234 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 PELI1Q96FA3 418 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 S100A16Q96FQ6 103 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 ZNF471Q9BX82 626 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 TUBA4BQ9H853 241 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 MED20Q9H944 212 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SEC61A2Q9H9S3 476 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OCIAD1Q9NX40 245 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 NCDNQ9UBB6 729 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR5V1Q9UGF6 321 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ANAPC10Q9UM13 185 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 GJE1A6NN92 205 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 PIN1P1O15428 100 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 MT-ND4LP03901 98 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ANXA2P07355 339 aaKnown RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 CSF1P09603 554 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 FAM157CP0CG43 387 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 PTHLHP12272 177 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ZNF14P17017 642 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 CASRP41180 1078 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 CDKN2AP42771 156 aaKnown RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 MMP16P51512 607 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 NAAAQ02083 359 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 INPP5JQ15735 1006 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 NKPD1Q17RQ9 610 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ALG10Q5BKT4 473 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 TMEM244Q5VVB8 128 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 LIPNQ5VXI9 398 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 HLA-DQA1Q5Y7H0 255 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ETFRF1Q6IPR1 90 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 LCN10Q6JVE6 187 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 DNM1P34Q6PK57 102 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 CBLN3Q6UW01 205 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 DRAM2Q6UX65 266 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 OLIG3Q7RTU3 272 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 TIPARPQ7Z3E1 657 aaKnown RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 HMGN2P46Q86SG4 172 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ZNF227Q86WZ6 799 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ANGPTL5Q86XS5 388 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 TGIF2LXQ8IUE1 241 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 GLB1L2Q8IW92 636 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 BEST3Q8N1M1 668 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 PAQR4Q8N4S7 273 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 ARRDC1Q8N5I2 433 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 SLC30A7Q8NEW0 376 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 SLC26A10Q8NG04 563 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 OR5AP2Q8NGF4 316 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 SYNPRQ8TBG9 265 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 DNAJA3Q96EY1 480 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 OR14A2Q96R54 314 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 OR8B4Q96RC9 309 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 CMKLR1Q99788 373 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 MICU1Q9BPX6 476 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 NAA11Q9BSU3 229 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 TBL1XR1Q9BZK7 514 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 TREM1Q9NP99 234 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 PRDM6Q9NQX0 595 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 MKI67P46013 3256 aaKnown RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 ZNF879B4DU55 563 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 FAM157AC9JC47 383 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 LDLRAD4O15165 306 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 TCAPO15273 167 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 SLC31A2O15432 143 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 HCRTR2O43614 444 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 EFNA2O43921 213 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ZNF354AO60765 605 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 SFTPCP11686 197 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 HLA-GP17693 338 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 S100A7P31151 101 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 PYCR1P32322 319 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 SPCS3P61009 180 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 SIRPAP78324 504 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 PJVKQ0ZLH3 352 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 PNLIPRP3Q17RR3 467 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 TRIM61Q5EBN2 209 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 NKAPLQ5M9Q1 402 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 TMEM200AQ86VY9 491 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 TMPRSS12Q86WS5 348 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms