RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PTGFRP43088 359 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 CCL11P51671 97 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 GCDHQ92947 438 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF416Q9BWM5 594 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ARL6Q9H0F7 186 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NECAP2Q9NVZ3 263 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TBC1D24Q9ULP9 559 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 UBE2J1Q9Y385 318 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 MED6O75586 246 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 MGMTP16455 207 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FUT3P21217 361 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PSMB10P40306 273 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 KCNK17Q96T54 332 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SLC5A7Q9GZV3 580 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TAAR5O14804 337 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 IL5P05113 134 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 CD34P28906 385 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 MECP2P51608 486 aaKnown RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 C2orf76Q3KRA6 126 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM30BQ3MIR4 351 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PDZD9Q8IXQ8 264 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ZDHHC22Q8N966 263 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 BTF3L4Q96K17 158 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF75AQ96N20 296 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NMNAT2Q9BZQ4 307 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ENY2Q9NPA8 101 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 HRH3Q9Y5N1 445 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 GABRA4P48169 554 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF121P58317 390 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FXYD6P3P58550 94 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 EFNB1P98172 346 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 CAMK2BQ13554 666 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 OR8B8Q15620 311 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FOXB2Q5VYV0 432 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FAM214BQ7L5A3 538 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SLC38A9Q8NBW4 561 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PIGCQ92535 297 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 MARCH7Q9H992 704 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PRH1P02810 166 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 RPA2P15927 270 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PMELP40967 661 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NLRC3Q7RTR2 1065 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NAA40Q86UY6 237 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM52Q8NDY8 209 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 OR4D11Q8NGI4 311 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 OR10J5Q8NHC4 309 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FBXO34Q9NWN3 711 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 OCIAD1Q9NX40 245 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SLCO1C1Q9NYB5 712 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 A0A1W2PNR3 127 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PSMD9O00233 223 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ETV2O00321 342 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NXPH2O95156 264 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 GIPP09681 153 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SPEM2Q0P670 501 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NKAPLQ5M9Q1 402 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 B3GLCTQ6Y288 498 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 LRRC18Q8N456 261 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 DOK4Q8TEW6 326 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 CT55Q8WUE5 264 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ELMOD3Q96FG2 381 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM246Q9BRR3 403 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TTTY10Q9BZA0 68 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NXF2Q9GZY0 626 aaKnown RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 EHFQ9NZC4 300 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 HSF4Q9ULV5 492 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FTH1P19P0C7X4 201 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ELK1P19419 428 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 RAB5CP51148 216 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FZD5Q13467 585 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NKPD1Q17RQ9 610 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SLC36A1Q7Z2H8 476 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF441Q8N8Z8 693 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NKX3-1Q99801 234 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PRDM14Q9GZV8 571 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ANKRD10Q9NXR5 420 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ALG5Q9Y673 324 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 CHCHD2Q9Y6H1 151 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FLNCQ14315 2725 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ARGFXA6NJG6 315 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 KLF7O75840 302 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 C6orf183Q5T699 404 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 GLIPR1L1Q6UWM5 242 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 COX15Q7KZN9 410 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 OR51F2Q8NH61 342 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FAM216AQ8WUB2 273 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ASB5Q8WWX0 329 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 VOPP1Q96AW1 172 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FGGYQ96C11 551 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 C20orf85Q9H1P6 137 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ST3GAL6Q9Y274 331 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 F8P00451 2351 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TSC22D2O75157 780 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OR2F2O95006 317 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 C1QBP02746 253 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SP1P08047 785 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 IL3RAP26951 378 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 IL2RGP31785 369 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OR2F1Q13607 317 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms