RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 CDC14BO60729 498 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 TSC22D2O75157 780 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 MRPL33O75394 65 aaKnown RBP13.16□□□□□ -0.3
GPC3-202ENST00000394299 CRTAPO75718 401 aaPredicted RBP13.16□□□□□ -0.3
GPC3-202ENST00000394299 SIX6O95475 246 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 ZNF735P0CB33 412 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 FCGR2AP12318 317 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 ZNF708P17019 499 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 HTR5AP47898 357 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 TAS2R19P59542 299 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 SCGB2B2Q4G0G5 96 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 TMEM229BQ8NBD8 167 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 MDS2Q8NDY4 140 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 OR10R2Q8NGX6 335 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 ZNF436Q9C0F3 470 aaPredicted RBP13.16□□□□□ -0.3
GPC3-202ENST00000394299 ZFHX2Q9C0A1 2572 aaPredicted RBP13.16□□□□□ -0.3
GPC3-202ENST00000394299 ZNF736B4DX44 427 aaPredicted RBP13.15□□□□□ -0.3
GPC3-202ENST00000394299 G3V3Q6 166 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 SULT1C2O00338 296 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 SSX5O60225 188 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 WISP2O76076 250 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 CYB5AP00167 134 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 WT1P19544 449 aaPredicted RBP13.15□□□□□ -0.3
GPC3-202ENST00000394299 ACTBP60709 375 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 ACTG1P63261 375 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 RAB35Q15286 201 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 C17orf107Q6ZR85 190 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 MEIOBQ8N635 442 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 ZNF431Q8TF32 576 aaPredicted RBP13.15□□□□□ -0.3
GPC3-202ENST00000394299 HYLS1Q96M11 299 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 OR2H1Q9GZK4 316 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 MGAT4CQ9UBM8 478 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 PRAF2O60831 178 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 LIPCP11150 499 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 PMP22Q01453 160 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 ECH1Q13011 328 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 PDSS1Q5T2R2 415 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 C6orf183Q5T699 404 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 BPIFB2Q8N4F0 458 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 CPEB3Q8NE35 698 aaKnown RBP13.15□□□□□ -0.3
GPC3-202ENST00000394299 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 EXO5Q9H790 373 aa13.15□□□□□ -0.3
GPC3-202ENST00000394299 A0A0A6YYH2 397 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 A6NJ64 397 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 NME2P1O60361 137 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 RAD51DO75771 328 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 CCL2P13500 99 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 NME2P22392 152 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 PTGFRP43088 359 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
GPC3-202ENST00000394299 ZNF626Q68DY1 528 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 THOC7Q6I9Y2 204 aaKnown RBP13.14□□□□□ -0.31
GPC3-202ENST00000394299 RAB12Q6IQ22 244 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 ZNF584Q8IVC4 421 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 MUC20Q8N307 709 aaPredicted RBP13.14□□□□□ -0.31
GPC3-202ENST00000394299 NAXEQ8NCW5 288 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 REEP6Q96HR9 211 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 PRRG4Q9BZD6 226 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 OR10A2Q9H208 303 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 SCPEP1Q9HB40 452 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 OR6C6A6NF89 314 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 CREBL2O60519 120 aaPredicted RBP13.14□□□□□ -0.31
GPC3-202ENST00000394299 ZNF780AO75290 641 aaPredicted RBP13.14□□□□□ -0.31
GPC3-202ENST00000394299 PLATP00750 562 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 GLRX5Q86SX6 157 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 ARHGAP5-AS1Q96IT6 56 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 TMEM59Q9BXS4 323 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 SLCO5A1Q9H2Y9 848 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 POFUT1Q9H488 388 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
GPC3-202ENST00000394299 PIPOXQ9P0Z9 390 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 TIMM10BQ9Y5J6 103 aa13.14□□□□□ -0.31
GPC3-202ENST00000394299 ZNF503-AS2A6NEH8 195 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 PRF1P14222 555 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 SERPINA2P20848 420 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 DNASE1P24855 282 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 SSTR2P30874 369 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 THBS4P35443 961 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 MECP2P51608 486 aaKnown RBP13.13□□□□□ -0.31
GPC3-202ENST00000394299 CCL11P51671 97 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 ARG2P78540 354 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 SCRN3Q0VDG4 424 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 PABPC1L2AQ5JQF8 200 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 DRAM2Q6UX65 266 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 OR13C8Q8NGS7 320 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 TNFAIP8L1Q8WVP5 186 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 CHST5Q9GZS9 411 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 ZNF552Q9H707 407 aaPredicted RBP13.13□□□□□ -0.31
GPC3-202ENST00000394299 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
GPC3-202ENST00000394299 TPD52L2O43399 206 aaKnown RBP13.13□□□□□ -0.31
GPC3-202ENST00000394299 ANGPTL7O43827 346 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 HLA-HP01893 362 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 IL5P05113 134 aa13.13□□□□□ -0.31
GPC3-202ENST00000394299 MELTFP08582 738 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms