RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 RIPPLY2Q5TAB7 128 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 RHOUQ7L0Q8 258 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 SNIP1Q8TAD8 396 aaKnown RBP13.04□□□□□ -0.32
MKS1-202ENST00000393119 HAVCR1Q96D42 359 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 CMBLQ96DG6 245 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 WASF3Q9UPY6 502 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 CTAG2O75638 210 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 CD79AP11912 226 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 CTSSP25774 331 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 INPP1P49441 399 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 FGD2Q7Z6J4 655 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 SIAH3Q8IW03 269 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 RBMXL3Q8N7X1 1067 aaKnown RBP13.03□□□□□ -0.32
MKS1-202ENST00000393119 S100A16Q96FQ6 103 aaKnown RBP13.03□□□□□ -0.32
MKS1-202ENST00000393119 EMC3Q9P0I2 261 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 MPC2O95563 127 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 IL18BPO95998 194 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 IGHG3P01860 377 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 MT-ND4P03905 459 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 BDKRB2P30411 391 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 OR3A4PP47883 348 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 TAS2R20P59543 309 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 RIPPLY1Q0D2K3 151 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 FOXF2Q12947 444 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 ZNF169Q14929 603 aaPredicted RBP13.03□□□□□ -0.32
MKS1-202ENST00000393119 RAB35Q15286 201 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 UBE2V2Q15819 145 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
MKS1-202ENST00000393119 GLT8D1Q68CQ7 371 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 CRIP3Q6Q6R5 217 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 COMMD7Q86VX2 200 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 MED12LQ86YW9 2145 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 OR8H3Q8N146 312 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 RPRMLQ8N4K4 120 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 ZADH2Q8N4Q0 377 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 GALNT11Q8NCW6 608 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 ATG5Q9H1Y0 275 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 ABCG5Q9H222 651 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 OR51B6Q9H340 312 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 ING4Q9UNL4 249 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 TIMM10BQ9Y5J6 103 aa13.03□□□□□ -0.32
MKS1-202ENST00000393119 WIPF3A6NGB9 483 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 ZNF724A8MTY0 619 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 C1QL2Q7Z5L3 287 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 SPACA3Q8IXA5 215 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 PAQR4Q8N4S7 273 aaPredicted RBP13.02□□□□□ -0.32
MKS1-202ENST00000393119 C9orf106Q8NAJ2 232 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 OR5D14Q8NGL3 314 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 RNF122Q9H9V4 155 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 ZNF71Q9NQZ8 489 aaPredicted RBP13.02□□□□□ -0.32
MKS1-202ENST00000393119 PARPBPQ9NWS1 579 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 PIGLQ9Y2B2 252 aa13.02□□□□□ -0.32
MKS1-202ENST00000393119 TRAV18A0A075B6X5 111 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 LOC100289279A0A1B0GTE1 492 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 TSC22D2O75157 780 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 IGLV3-1P01715 115 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 RAB3AP20336 220 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 IL32P24001 234 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 CCR6P51684 374 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 UNC119Q13432 240 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 EXOSC2Q13868 293 aaKnown RBP13.02□□□□□ -0.33
MKS1-202ENST00000393119 CD276Q5ZPR3 534 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 ACBD4Q8NC06 268 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 EXTL1Q92935 676 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 PIGTQ969N2 578 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 SPTSSAQ969W0 71 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 PLEKHA1Q9HB21 404 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 CRIM1Q9NZV1 1036 aa13.02□□□□□ -0.33
MKS1-202ENST00000393119 EDN3P14138 238 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 CCL1P22362 96 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 GDNFP39905 211 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 MMP15P51511 669 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 ZNF92Q03936 586 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 SCRN3Q0VDG4 424 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 RNPS1Q15287 305 aaKnown RBP13.01□□□□□ -0.33
MKS1-202ENST00000393119 LGALSLQ3ZCW2 172 aaPredicted RBP13.01□□□□□ -0.33
MKS1-202ENST00000393119 ZNF529Q6P280 563 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 MYPOPQ86VE0 399 aaPredicted RBP13.01□□□□□ -0.33
MKS1-202ENST00000393119 CNEP1R1Q8N9A8 125 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 ABHD17AQ96GS6 310 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 PRDM14Q9GZV8 571 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 MOB1AQ9H8S9 216 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 TMEM138Q9NPI0 162 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 RP1L1Q8IWN7 2480 aaPredicted RBP13.01□□□□□ -0.33
MKS1-202ENST00000393119 PRR14LQ5THK1 2151 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 TSPAN9O75954 239 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 DOK3Q7L591 496 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 ZNF627Q7L945 461 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 ANGPTL5Q86XS5 388 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 ZNF584Q8IVC4 421 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 TMEM104Q8NE00 496 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 REEP6Q96HR9 211 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 LINC00470Q9BZP3 86 aa13.01□□□□□ -0.33
MKS1-202ENST00000393119 MED28Q9H204 178 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms