RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ST6GALNAC5Q9BVH7 336 aa14.4□□□□□ -0.11
VPS16-203ENST00000380469 NKX6-2Q9C056 277 aaPredicted RBP14.4□□□□□ -0.11
VPS16-203ENST00000380469 SHPKQ9UHJ6 478 aa14.4□□□□□ -0.11
VPS16-203ENST00000380469 LOC102725191A0A1B0GVB3 256 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 MPTX1A8MV57 137 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 DNASE2O00115 360 aaPredicted RBP14.39□□□□□ -0.11
VPS16-203ENST00000380469 MFNGO00587 321 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 SIGLEC5O15389 551 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 NR2C1P13056 603 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 ADH6P28332 368 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 CLDN17P56750 224 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 SIGLEC14Q08ET2 396 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 AIMP2Q13155 320 aaKnown RBP14.39□□□□□ -0.11
VPS16-203ENST00000380469 ZNF239Q16600 458 aaKnown RBP14.39□□□□□ -0.11
VPS16-203ENST00000380469 OR14K1Q8NGZ2 314 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 GHRLQ9UBU3 117 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 VCANP13611 3396 aa14.39□□□□□ -0.11
VPS16-203ENST00000380469 RAMP1O60894 148 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 ARHGDIBP52566 201 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 TAS2R46P59540 309 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 NAAAQ02083 359 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 EIF3IQ13347 325 aaKnown RBP14.38□□□□□ -0.11
VPS16-203ENST00000380469 BAP18Q8IXM2 172 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 TMEM230Q96A57 120 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 RASL10BQ96S79 203 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 CABIN1Q9Y6J0 2220 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 IGKV1-9A0A0C4DH69 117 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 TP53I11O14683 189 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 FGF16O43320 207 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 PLATP00750 562 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 PTGFRP43088 359 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
VPS16-203ENST00000380469 LSM6P62312 80 aaKnown RBP14.38□□□□□ -0.11
VPS16-203ENST00000380469 CSNK2A1P68400 391 aaPredicted RBP14.38□□□□□ -0.11
VPS16-203ENST00000380469 ZNF169Q14929 603 aaPredicted RBP14.38□□□□□ -0.11
VPS16-203ENST00000380469 KISS1Q15726 138 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 FAM89BQ8N5H3 189 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 WDSUB1Q8N9V3 476 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 CSNK2A3Q8NEV1 391 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 SLC30A7Q8NEW0 376 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 SPSB2Q99619 263 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 ZNF416Q9BWM5 594 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 SLC6A15Q9H2J7 730 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 METTL8Q9H825 291 aaKnown RBP14.38□□□□□ -0.11
VPS16-203ENST00000380469 ZNF160Q9HCG1 818 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 SLC39A1Q9NY26 324 aa14.38□□□□□ -0.11
VPS16-203ENST00000380469 SDK1Q7Z5N4 2213 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 PNLIPP16233 465 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 ANOS1P23352 680 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 SHBQ15464 509 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 TMPPEQ6ZT21 453 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 PEG10Q86TG7 708 aaKnown RBP14.37□□□□□ -0.11
VPS16-203ENST00000380469 FADS6Q8N9I5 356 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 OR13G1Q8NGZ3 307 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 PAQR8Q8TEZ7 354 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 SSC4DQ8WTU2 575 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 RNF141Q8WVD5 230 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 RTBDNQ9BSG5 229 aaPredicted RBP14.37□□□□□ -0.11
VPS16-203ENST00000380469 ADAP1O75689 374 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 PRF1P14222 555 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 PI3P19957 117 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 CTSSP25774 331 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 SLC6A9P48067 706 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 CSNK1A1P48729 337 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 SNU13P55769 128 aaKnown RBP14.37□□□□□ -0.11
VPS16-203ENST00000380469 CCL7P80098 99 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 NKAPLQ5M9Q1 402 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 GUSBP11Q6P575 273 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 PRSS54Q6PEW0 395 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 Q7L0L9 218 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 SPEM1Q8N4L4 309 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 GJC3Q8NFK1 279 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 RRNAD1Q96FB5 475 aaKnown RBP14.37□□□□□ -0.11
VPS16-203ENST00000380469 S100A13Q99584 98 aa14.37□□□□□ -0.11
VPS16-203ENST00000380469 TMEM218A2RU14 115 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 ATG12O94817 140 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 ONECUT2O95948 504 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 KLK2P20151 261 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 MSR1P21757 451 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 BLVRBP30043 206 aaPredicted RBP14.36□□□□□ -0.11
VPS16-203ENST00000380469 THBS4P35443 961 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 PLEKHN1Q494U1 663 aaPredicted RBP14.36□□□□□ -0.11
VPS16-203ENST00000380469 PRAMEF20Q5VT98 475 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 ZNF385CQ66K41 422 aaPredicted RBP14.36□□□□□ -0.11
VPS16-203ENST00000380469 ZSCAN4Q8NAM6 433 aaPredicted RBP14.36□□□□□ -0.11
VPS16-203ENST00000380469 CLRN3Q8NCR9 226 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 OR5T2Q8NGG2 359 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 OR5D18Q8NGL1 313 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 NPRL2Q8WTW4 380 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 ARL11Q969Q4 196 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 TSNAXQ99598 290 aaKnown RBP14.36□□□□□ -0.11
VPS16-203ENST00000380469 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.36□□□□□ -0.11
VPS16-203ENST00000380469 EHFQ9NZC4 300 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 IGHV5-10-1A0A0J9YXX1 117 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 NUDT19A8MXV4 375 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 F5H5K5 113 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 H0YIZ8 118 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 SDCBPO00560 298 aaPredicted RBP14.36□□□□□ -0.11
VPS16-203ENST00000380469 HTR3BO95264 441 aa14.36□□□□□ -0.11
VPS16-203ENST00000380469 CHRFAM7AQ494W8 412 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms