RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 MS4A3Q96HJ5 214 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 ASB16Q96NS5 453 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 RBFOX2O43251 390 aaKnown RBP eCLIP7.95□□□□□ -1.147e-8■■■■□ 24.6
LIG3-202ENST00000378526 CER1O95813 267 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 HLA-GP17693 338 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 CDX1P47902 265 aaPredicted RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 GPNMBQ14956 572 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 ZNF77Q15935 545 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 MUC15Q8N387 334 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 OR10X1Q8NGY0 326 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 SPPL3Q8TCT6 385 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 TMEM101Q96IK0 257 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 GSTO2Q9H4Y5 243 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 ZNF195O14628 629 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 HIST1H1DP16402 221 aaKnown RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 ELAVL4P26378 380 aaKnown RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 HSPB9Q9BQS6 159 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 TMEM147Q9BVK8 224 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 ULBP2Q9BZM5 246 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 PDZD7Q9H5P4 517 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 FTSJ1Q9UET6 329 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 OR51B4Q9Y5P0 310 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 MBD5Q9P267 1494 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 TAPBPO15533 448 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 CHST1O43916 411 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 MNX1P50219 401 aaPredicted RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 DCDP81605 110 aaKnown RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 IZUMO4Q1ZYL8 232 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 PRICKLE4Q2TBC4 344 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 LPPQ93052 612 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 MARVELD3Q96A59 401 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 APIPQ96GX9 242 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 F2RL3Q96RI0 385 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 P2RY12Q9H244 342 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 OR5AC2Q9NZP5 309 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 MED12Q93074 2177 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 AKAP11Q9UKA4 1901 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 LOC390937A0A1W2PQ73 354 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 LGALS4P56470 323 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 LRRTM3Q86VH5 581 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 OR52B4Q8NGK2 314 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 GPR150Q8NGU9 434 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 RTP3Q9BQQ7 232 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 SLC7A10Q9NS82 523 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 A0A1B0GW15 77 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 ARRDC5A6NEK1 342 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 SNURFLB1AK76 121 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 H3BML4 177 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 NDUFB6O95139 128 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 STATHP02808 62 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 CSNK1EP49674 416 aaKnown RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 MRGPRGQ86SM5 289 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 C4orf32Q8N8J7 132 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 OR5D18Q8NGL1 313 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 ROBO4Q8WZ75 1007 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 NXPE3Q969Y0 559 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 VDAC3Q9Y277 283 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 ZCCHC11Q5TAX3 1644 aaKnown RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 A0A1B0GWB2 263 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 C11orf94C9JXX5 98 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 F5H697 171 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 DUX1O43812 170 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 FCGR3AP08637 254 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 KLF3P57682 345 aaPredicted RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 FKBP1CQ5VVH2 108 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 SLC35E3Q7Z769 313 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 YIPF6Q96EC8 236 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PARP11Q9NR21 331 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 CORINQ9Y5Q5 1042 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 EIF3GO75821 320 aaKnown RBP eCLIP7.94□□□□□ -1.14
LIG3-202ENST00000378526 KIR2DS2P43631 304 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 TIAL1Q01085 375 aaKnown RBP eCLIP7.94□□□□□ -1.14
LIG3-202ENST00000378526 RTP4Q96DX8 246 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PRELID3AQ96N28 172 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 NMNAT3Q96T66 252 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 TMEM38AQ9H6F2 299 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 A4GALTQ9NPC4 353 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 FBXL12Q9NXK8 326 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 CYSLTR1Q9Y271 337 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PTPRMP28827 1452 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 TULP4Q9NRJ4 1543 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 M0QZ24 198 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 ABOP16442 354 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 MEF2AQ02078 507 aaPredicted RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 ZNF345Q14585 488 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PMVKQ15126 192 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 TMEM249Q2WGJ8 235 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 BHLHA15Q7RTS1 189 aaPredicted RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 POC1AQ8NBT0 407 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 OR2I1PQ8NGU4 316 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 FBXL18Q96ME1 805 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 KLRG2A4D1S0 409 aaPredicted RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 MS4A18H0YCH9 400 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 H7C2G1 150 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 ZNF415Q09FC8 603 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 OR8B8Q15620 311 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 IGFBP7Q16270 282 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 MS4A18Q3C1V0 323 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 FBXL22Q6P050 247 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 CLEC20AQ6ZU45 233 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms