RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SSBP1Q04837 148 aaKnown RBP5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PWWP2BQ6NUJ5 590 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF808Q8N4W9 903 aaPredicted RBP5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PISDQ9UG56 409 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PRELID3BQ9Y3B1 194 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 KPTNQ9Y664 436 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 SIRPB1O00241 398 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 TAF9Q16594 264 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 WNT2BQ93097 391 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 FBXO17Q96EF6 278 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PPP1R3EQ9H7J1 279 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 LAMTOR5O43504 91 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 LIMK1P53667 647 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 RPS16P62249 146 aaKnown RBP5.85□□□□□ -1.47
SMC1A-202ENST00000375340 IL22RA1Q8N6P7 574 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 DMBX1Q8NFW5 382 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 IFI44Q8TCB0 444 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 RXFP4Q8TDU9 374 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 UQCC2Q9BRT2 126 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 UFSP2Q9NUQ7 469 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 C5orf49A4QMS7 147 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF724A8MTY0 619 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 H3BMH7 237 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 CYR61O00622 381 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 CTDSPLO15194 276 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 HPNP05981 417 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 SNRPEP62304 92 aaKnown RBP5.85□□□□□ -1.47
SMC1A-202ENST00000375340 LINC00696Q6ZRV3 163 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 BAP18Q8IXM2 172 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 OR10G3Q8NGC4 313 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 OR5AP2Q8NGF4 316 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 OXGR1Q96P68 337 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 M0R135 149 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 NRASP01111 189 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 GRPP07492 148 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 CTSBP07858 339 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 ERVK-16P61578 105 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 LHFPL2Q6ZUX7 228 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 C6orf201Q7Z4U5 140 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 CATSPERDQ86XM0 798 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 GRAMD2AQ8IUY3 354 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 ETFBKMTQ8IXQ9 262 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 MKXQ8IYA7 352 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 AKR7LQ8NHP1 331 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 TERB2Q8NHR7 220 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF799Q96GE5 643 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 GCM1Q9NP62 436 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 ZFP64Q9NPA5 681 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 FSCN3Q9NQT6 498 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-202ENST00000375340 H7C1Q1 480 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 CLEC12BQ2HXU8 276 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 C17orf78Q8N4C9 275 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 OR10J5Q8NHC4 309 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 RHBDD1Q8TEB9 315 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 NIPSNAP3BQ9BS92 247 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 DUSP23Q9BVJ7 150 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 VN1R1Q9GZP7 353 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 LMX1BO60663 402 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 ECI1P42126 302 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 SYT13Q7L8C5 426 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 LIPHQ8WWY8 451 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 PGLYRP3Q96LB9 341 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF587BE7ETH6 402 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 MPC2O95563 127 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 RPS2P15880 293 aaKnown RBP5.85□□□□□ -1.47
SMC1A-202ENST00000375340 KIR3DL2P43630 455 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 PSG6Q00889 435 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 IL10RAQ13651 578 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 TRPM7Q96QT4 1865 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 MFSD2BA6NFX1 497 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 GLAP06280 429 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 PTAFRP25105 342 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 C19orf57Q0VDD7 668 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 SKP2Q13309 424 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 RAB32Q13637 225 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 TSPO2Q5TGU0 170 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 MRGPREQ86SM8 312 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 LGI3Q8N145 548 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM74BQ9NUR3 256 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 MTCH1Q9NZJ7 389 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 TRAV20A0A0B4J274 112 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 TAAR5O14804 337 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 NKAIN1Q4KMZ8 207 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 FAM109BQ6ICB4 259 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-202ENST00000375340 VHLLQ6RSH7 139 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 LCN15Q6UWW0 184 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 OR2AE1Q8NHA4 323 aa5.85□□□□□ -1.47
SMC1A-202ENST00000375340 DEGS1O15121 323 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 CFDP00746 253 aaPredicted RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 H2AFB1P0C5Y9 115 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 FPR2P25090 351 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 ACAA2P42765 397 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 CCL7P80098 99 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 RPL19P84098 196 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF425Q6IV72 752 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 KCNIP4Q6PIL6 250 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 MRPS18BQ9Y676 258 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 OR5H15A6NDH6 313 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 PTP4A3O75365 173 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms