RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FAM208BQ5VWN6 2430 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 ASCC3Q8N3C0 2202 aaKnown RBP12.3□□□□□ -0.44
HMGCL-203ENST00000374490 SEC16AO15027 2179 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 FRYQ5TBA9 3013 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 A0A0B4J2A0 478 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 A8MXK9 166 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CDC14BO60729 498 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 DUS4LO95620 317 aaKnown RBP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 HCKP08631 526 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 PRF1P14222 555 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 HIST1H1DP16402 221 aaKnown RBP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 GNB3P16520 340 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 POU3F2P20265 443 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 HRH1P35367 487 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CSNK1A1P48729 337 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 IL13RA1P78552 427 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 ZFP36L1Q07352 338 aaKnown RBP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 ECH1Q13011 328 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 PPP1R1AQ13522 171 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 RTL6Q6ICC9 239 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 OR4K15Q8NH41 348 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 THAP6Q8TBB0 222 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 M1APQ8TC57 530 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 ST8SIA2Q92186 375 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 TMEM54Q969K7 222 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 C10orf35Q96D05 121 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CMBLQ96DG6 245 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CXorf58Q96LI9 332 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF700Q9H0M5 742 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CST11Q9H112 138 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 SHPKQ9UHJ6 478 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 KCNMB2Q9Y691 235 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 LAMA1P25391 3075 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 C9J4A7 227 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 SSX5O60225 188 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 MPIG6BO95866 241 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 KLK3P07288 261 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 FGF2P09038 288 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CDAP32320 146 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 SFTPDP35247 375 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CLDN17P56750 224 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CYCSP99999 105 aaKnown RBP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 ACOT7LQ6ZUV0 252 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 FAM57BQ71RH2 274 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 GLRX5Q86SX6 157 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 HOGA1Q86XE5 327 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 GALNT11Q8NCW6 608 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 GJC3Q8NFK1 279 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 OR14K1Q8NGZ2 314 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 FBXW5Q969U6 566 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 PGAM5Q96HS1 289 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 TMEM41AQ96HV5 264 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 FAM71F1Q96KD3 344 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-203ENST00000374490 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 ANGPTL4Q9BY76 406 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 DNTTIP1Q9H147 329 aa12.29□□□□□ -0.44
HMGCL-203ENST00000374490 IGF2RP11717 2491 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 A0A0U1RQV5 110 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 CEACAM18A8MTB9 384 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 RER1O15258 196 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 CA11O75493 328 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 IGLV3-1P01715 115 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 ABOP16442 354 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF17P17021 662 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 DLSTP36957 453 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 ALDH3B1P43353 468 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 DSCR4P56555 118 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-203ENST00000374490 CSNK2A1P68400 391 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-203ENST00000374490 PPA1Q15181 289 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 NSUN5P2Q63ZY6 315 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 OR52W1Q6IF63 320 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 LCN10Q6JVE6 187 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 TMEM17Q86X19 198 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 BVESQ8NE79 360 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 PXT1Q8NFP0 134 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 SSC4DQ8WTU2 575 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 PP6455Q8WZ26 134 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 C1orf147Q96MC9 270 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-203ENST00000374490 GPER1Q99527 375 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 NELFAQ9H3P2 528 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 KCNK7Q9Y2U2 307 aa12.28□□□□□ -0.44
HMGCL-203ENST00000374490 IGHV1-45A0A0A0MS14 117 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 GJE1A6NN92 205 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF814B7Z6K7 855 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 BET1O15155 118 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 EFSO43281 561 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 DNPH1O43598 174 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 SPDEFO95238 335 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 HPP00738 406 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 TAS2R46P59540 309 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 H3F3AP84243 136 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 MC2RQ01718 297 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 MFAP5Q13361 173 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 HYAL4Q2M3T9 481 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 JMJD6Q6NYC1 403 aaPredicted RBP12.27□□□□□ -0.44
HMGCL-203ENST00000374490 C17orf107Q6ZR85 190 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 Q6ZSR3 168 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms