RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 FIGNL2A6NMB9 653 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 PPP1R2P9O14990 202 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 ISG15P05161 165 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF708P17019 499 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 CXCR1P25024 350 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 SUCLG1P53597 346 aaKnown RBP13.25□□□□□ -0.29
UBAP1-202ENST00000359544 CLDN6P56747 220 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
UBAP1-202ENST00000359544 UNC119Q13432 240 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 HIST2H3PS2Q5TEC6 136 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 RPUSD3Q6P087 351 aaKnown RBP13.25□□□□□ -0.29
UBAP1-202ENST00000359544 MED25Q71SY5 747 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 PEG10Q86TG7 708 aaKnown RBP13.25□□□□□ -0.29
UBAP1-202ENST00000359544 TMEFF1Q8IYR6 380 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 LFNGQ8NES3 379 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 MR1Q95460 341 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 TCTN2Q96GX1 697 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 ANAPC10Q9UM13 185 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 STRAPQ9Y3F4 350 aaKnown RBP13.25□□□□□ -0.29
UBAP1-202ENST00000359544 LRP12Q9Y561 859 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 R4GMQ9 66 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 RPL36A-HNRNPH2H7BZ11 118 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 SFTPBP07988 381 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 TMEM33P57088 247 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF674Q2M3X9 581 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 NUP54Q7Z3B4 507 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 FOXRED2Q8IWF2 684 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 MUCL1Q96DR8 90 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 ARV1Q9H2C2 271 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 GOLGA4Q13439 2230 aaKnown RBP13.24□□□□□ -0.29
UBAP1-202ENST00000359544 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 A0A1B0GW64 132 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 PRR19A6NJB7 356 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 ADAM10O14672 748 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF217O75362 1048 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 APBB3O95704 486 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 BCKDHBP21953 392 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 HSD11B1P28845 292 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 ADPRHP54922 357 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 SLC35A1P78382 337 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 CHAF1BQ13112 559 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 ASCL5Q7RTU5 278 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 ST7LQ8TDW4 575 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 C8orf44Q96CB5 159 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 PRRX2Q99811 253 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 GABRG3Q99928 467 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 SRMSQ9H3Y6 488 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 UNKLQ9H9P5 680 aaKnown RBP13.24□□□□□ -0.29
UBAP1-202ENST00000359544 PLEKHA2Q9HB19 425 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 C19orf12Q9NSK7 152 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 PPP1R14DQ9NXH3 145 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 PRR13Q9NZ81 148 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 PILRAQ9UKJ1 303 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 GON4LQ3T8J9 2241 aa13.24□□□□□ -0.29
UBAP1-202ENST00000359544 CHRM2P08172 466 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 GSTP1P09211 210 aaKnown RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 QRFPP83859 136 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 GAMTQ14353 236 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 SOHLH1Q5JUK2 328 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF761Q86XN6 746 aaPredicted RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 SLC22A24Q8N4F4 322 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 SUMF2Q8NBJ7 301 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 ANKRD9Q96BM1 317 aaPredicted RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 VSTM2LQ96N03 204 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 GNRHR2Q96P88 292 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 RTBDNQ9BSG5 229 aaPredicted RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 ABCA7Q8IZY2 2146 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 SYT7O43581 403 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 DEDDO75618 318 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 NUBP1P53384 320 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 HSD11B2P80365 405 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 DGAT2L6Q6ZPD8 337 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 LRRC18Q8N456 261 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 OR5H2Q8NGV7 314 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 OR52N5Q8NH56 324 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 RERGQ96A58 199 aaPredicted RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 MRGPRX1Q96LB2 322 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 PARP12Q9H0J9 701 aaKnown RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 C1orf123Q9NWV4 160 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 LRIT1Q9P2V4 623 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 FBLN5Q9UBX5 448 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 SUSD2Q9UGT4 822 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 ATXN7L1Q9ULK2 861 aaPredicted RBP13.23□□□□□ -0.29
UBAP1-202ENST00000359544 CYP8B1Q9UNU6 501 aa13.23□□□□□ -0.29
UBAP1-202ENST00000359544 FOXS1O43638 330 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 OR13C7P0DN81 318 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 VSIG8P0DPA2 414 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF84P51523 738 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 SURF2Q15527 256 aaPredicted RBP13.22□□□□□ -0.29
UBAP1-202ENST00000359544 IAH1Q2TAA2 248 aaPredicted RBP13.22□□□□□ -0.29
UBAP1-202ENST00000359544 CLEC9AQ6UXN8 241 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 TTLL10Q6ZVT0 673 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 FAM219AQ8IW50 185 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 CA13Q8N1Q1 262 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 OR5T3Q8NGG3 340 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 OR13D1Q8NGV5 346 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 OR4C3Q8NH37 302 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms