RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 OR4C16Q8NGL9 310 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 TNFAIP8L1Q8WVP5 186 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 GIMAP1Q8WWP7 306 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 ST6GAL2Q96JF0 529 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 PARPBPQ9NWS1 579 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 MCTS1Q9ULC4 181 aaKnown RBP12.07□□□□□ -0.48
LSS-201ENST00000356396 KLF13Q9Y2Y9 288 aaPredicted RBP12.07□□□□□ -0.48
LSS-201ENST00000356396 HTR3EA5X5Y0 456 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 CYTIPO60759 359 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 ATP6V1G1O75348 118 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 HTR3BO95264 441 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 TMEM225BP0DP42 221 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 MMP15P51511 669 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 CCR9P51686 369 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 C2orf68Q2NKX9 166 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 C6orf201Q7Z4U5 140 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 ARMC10Q8N2F6 343 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 MEIOBQ8N635 442 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 TEX19Q8NA77 164 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 HAVCR2Q8TDQ0 301 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 FCAMRQ8WWV6 532 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 APH1AQ96BI3 265 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 ST6GALNAC5Q9BVH7 336 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 PTTG3PQ9NZH4 202 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 MRPS28Q9Y2Q9 187 aaKnown RBP12.07□□□□□ -0.48
LSS-201ENST00000356396 STARD10Q9Y365 291 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 RHBDD3Q9Y3P4 386 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 GJE1A6NN92 205 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 MNDAP41218 407 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 KISS1Q15726 138 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ST3GAL2Q16842 350 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 PIGYQ3MUY2 71 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 FGD2Q7Z6J4 655 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 C9orf106Q8NAJ2 232 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ZFP62Q8NB50 900 aaPredicted RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 OR5D14Q8NGL3 314 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 OR14K1Q8NGZ2 314 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 OR6F1Q8NGZ6 308 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 OR1F12Q8NHA8 337 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 OR2H1Q9GZK4 316 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 OPN3Q9H1Y3 402 aaPredicted RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 B3GNT2Q9NY97 397 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 CIB4A0PJX0 185 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ZNF850A8MQ14 1090 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 SYNGR3O43761 229 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 PMP2P02689 132 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 HRGP04196 525 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 HPNP05981 417 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ACHEP22303 614 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 OPRM1P35372 400 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 NPBWR2P48146 333 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 BLVRAP53004 296 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 PLEKHN1Q494U1 663 aaPredicted RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 CDNFQ49AH0 187 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ABLIM2Q6H8Q1 611 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 CRIP3Q6Q6R5 217 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 GLRX5Q86SX6 157 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 CALHM1Q8IU99 346 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ZNF584Q8IVC4 421 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 C17orf78Q8N4C9 275 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 CISD2Q8N5K1 135 aaKnown RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 ZBTB8BQ8NAP8 495 aaPredicted RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 SMIM4Q8WVI0 70 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 KCNE4Q8WWG9 221 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ARHGAP5-AS1Q96IT6 56 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 LOC100289279A0A1B0GTE1 492 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 PYCARD-AS1I3L0S3 204 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 GLSO94925 669 aaPredicted RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 VAMP5O95183 116 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 IL18BPO95998 194 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 UBCP0CG48 685 aaKnown RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 CEACAM1P13688 526 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 CD53P19397 219 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 SLC6A1P30531 599 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 SSTR2P30874 369 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 PER3P56645 1201 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 KLF9Q13886 244 aaPredicted RBP12.06□□□□□ -0.48
LSS-201ENST00000356396 PLAC9Q5JTB6 97 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 HAS2Q92819 552 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 ABHD17AQ96GS6 310 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 TMEM138Q9NPI0 162 aa12.06□□□□□ -0.48
LSS-201ENST00000356396 SLC34A2O95436 690 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 DLX5P56178 289 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 MTCP1P56278 107 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 MRPL28Q13084 256 aaKnown RBP12.05□□□□□ -0.48
LSS-201ENST00000356396 FAM27BQ5VT28 67 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 C22orf34Q6ZV56 151 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 TREM2Q9NZC2 230 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 KCNK7Q9Y2U2 307 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 HRNRQ86YZ3 2850 aaPredicted RBP12.05□□□□□ -0.48
LSS-201ENST00000356396 GALP22466 123 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 MRPS15P82914 257 aaKnown RBP12.05□□□□□ -0.48
LSS-201ENST00000356396 PLA1AQ53H76 456 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 ZNF782Q6ZMW2 699 aaPredicted RBP12.05□□□□□ -0.48
LSS-201ENST00000356396 LINC00299Q6ZSB3 139 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 MOB3CQ70IA8 216 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 FAM109AQ8N4B1 249 aa12.05□□□□□ -0.48
LSS-201ENST00000356396 OR11H7Q8NGC8 314 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms