RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 OR10G3Q8NGC4 313 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR13G1Q8NGZ3 307 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR6X1Q8NH79 312 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ITFG2Q969R8 447 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 MARC2Q969Z3 335 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 NEURL3Q96EH8 262 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF396Q96N95 335 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 TRIM4Q9C037 500 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 RBFOX1Q9NWB1 397 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 DDIT4Q9NX09 232 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 FN1P02751 2386 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 RRBP1Q9P2E9 1410 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 NRXN2Q9P2S2 1712 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 HUWE1Q7Z6Z7 4374 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 NDUFAF8A1L188 74 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CENPXA8MT69 81 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SOX15O60248 233 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GCGP01275 180 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SLC35E2BP0CK96 405 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GFAPP14136 432 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 HOXB8P17481 243 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CD40LGP29965 261 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GNRHRP30968 328 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CDC34P49427 236 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF138P52744 262 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 RPL31P62899 125 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SLC35B1P78383 322 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SPA17Q15506 151 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 KDM4DQ6B0I6 523 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 OR2T5Q6IEZ7 315 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PAMR1Q6UXH9 720 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ACP7Q6ZNF0 438 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 UNC93AQ86WB7 457 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 HORMAD1Q86X24 394 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FAM71AQ8IYT1 594 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 NKAPP1Q8N9T2 125 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 C11orf72Q8NBR9 251 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 OR4F15Q8NGB8 312 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 OR2T29Q8NH02 315 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 RNASEH2CQ8TDP1 164 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM158Q8WZ71 300 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 STMN2Q93045 179 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 KRTAP1-5Q9BYS1 174 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF702PQ9H963 129 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 VCX3AQ9NNX9 186 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 NLE1Q9NVX2 485 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF581Q9P0T4 197 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 HEBP2Q9Y5Z4 205 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 BCORQ6W2J9 1755 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZBED9Q6R2W3 1325 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TENM2Q9NT68 2774 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TPRP12270 2363 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TNRQ92752 1358 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SMIM26A0A096LP01 95 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FABP12A6NFH5 140 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 A8MUA0 341 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PRAMEF26H0Y7S4 382 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CALUO43852 315 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 EDIL3O43854 480 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CD5LO43866 347 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FAM189A1O60320 539 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 NPIPB7O75200 414 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SUPT7LO94864 414 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 IGHV3-23P01764 117 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 THY1P04216 161 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CSF3P09919 207 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF883P0CG24 379 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF3P17036 446 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SERPINB5P36952 375 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 KIR2DS4P43632 304 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 AQP5P55064 265 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 RBMY1FQ15415 496 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SNRNP35Q16560 246 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SGCAQ16586 387 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TPRG1LQ5T0D9 272 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM205Q6UW68 189 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ABHD13Q7L211 337 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SNX20Q7Z614 316 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 POM121L12Q8N7R1 296 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TFB1MQ8WVM0 346 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 RXFP2Q8WXD0 754 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 DNASE2BQ8WZ79 361 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GTF2H4Q92759 462 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CDKL2Q92772 493 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FAM3DQ96BQ1 224 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CATSPER2Q96P56 530 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ABCB10Q9NRK6 738 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SLC39A1Q9NY26 324 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CD274Q9NZQ7 290 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 VSIG4Q9Y279 399 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FLVCR1Q9Y5Y0 555 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 MTCL1Q9Y4B5 1905 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 OVOS2A0A0G2JMS6 1433 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FHAD1B1AJZ9 1412 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PIKFYVEQ9Y2I7 2098 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ACACBO00763 2458 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 KIF26AQ9ULI4 1882 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SACSQ9NZJ4 4579 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 LRPPRCP42704 1394 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 EIF3AQ14152 1382 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms