RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ABHD17CQ6PCB6 329 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ZAR1Q86SH2 424 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 MRPL41Q8IXM3 137 aaKnown RBP11.78□□□□□ -0.52
IFT88-202ENST00000351808 C17orf78Q8N4C9 275 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 OR52E1Q8NGJ3 308 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 RSPRY1Q96DX4 576 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 HIST1H2AAQ96QV6 131 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ELOVL3Q9HB03 270 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 DNAJC4Q9NNZ3 241 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 DOCK8Q8NF50 2099 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 SCGB1D1O95968 90 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 APODP05090 189 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 TMEM11P17152 192 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 CD82P27701 267 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 TFPI2P48307 235 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 FCRL6Q6DN72 434 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 RNF44Q7L0R7 432 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 ARL14EPQ8N8R7 260 aaPredicted RBP11.77□□□□□ -0.52
IFT88-202ENST00000351808 ASB5Q8WWX0 329 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 CYYR1Q96J86 154 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 OR8D2Q9GZM6 311 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 SMDT1Q9H4I9 107 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 DKKL1Q9UK85 242 aa11.77□□□□□ -0.52
IFT88-202ENST00000351808 A0A1W2PPV9 198 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 METTL12A8MUP2 240 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 SLC35G6P0C7Q6 338 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 ELLP55199 621 aaPredicted RBP11.77□□□□□ -0.53
IFT88-202ENST00000351808 TLE4Q04727 773 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 PMS2P11Q13670 270 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 PTCRAQ6ISU1 281 aaPredicted RBP11.77□□□□□ -0.53
IFT88-202ENST00000351808 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 GALNTL5Q7Z4T8 443 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 HHIPL1Q96JK4 782 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 GPR173Q9NS66 373 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 HCSTQ9UBK5 93 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.53
IFT88-202ENST00000351808 MPDZO75970 2070 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 IGKV1-8A0A0C4DH67 115 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 MYADML2A6NDP7 307 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 A6NIZ1 184 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 GUSBP08236 651 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 BCL6P41182 706 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 P2RY1P47900 373 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 RAP1BP61224 184 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 P2RY6Q15077 328 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 METTL27Q8N6F8 245 aaPredicted RBP11.77□□□□□ -0.53
IFT88-202ENST00000351808 CDH20Q9HBT6 801 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 MKKSQ9NPJ1 570 aaPredicted RBP11.77□□□□□ -0.53
IFT88-202ENST00000351808 WSB1Q9Y6I7 421 aa11.77□□□□□ -0.53
IFT88-202ENST00000351808 K7N7A8 449 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 NUDT21O43809 227 aaKnown RBP11.76□□□□□ -0.53
IFT88-202ENST00000351808 HNF1AP20823 631 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 EMDP50402 254 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 MEP1BQ16820 701 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 MAJINQ3KP22 176 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 CXCL17Q6UXB2 119 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 SLC35E3Q7Z769 313 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 OR10A7Q8NGE5 316 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 OR1N1Q8NGS0 311 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 FOXN4Q96NZ1 517 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 WFIKKN1Q96NZ8 548 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 SERINC2Q96SA4 455 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 ZNF860A6NHJ4 632 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 AHSA1O95433 338 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 KLF8O95600 359 aaPredicted RBP11.76□□□□□ -0.53
IFT88-202ENST00000351808 DIRAS3O95661 229 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 KNG1P01042 644 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 MMP16P51512 607 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 HLA-DRB3P79483 266 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 DEGS2Q6QHC5 323 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 CMTM8Q8IZV2 173 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 VN1R2Q8NFZ6 395 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 CABLES2Q9BTV7 478 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 HS3ST2Q9Y278 367 aa11.76□□□□□ -0.53
IFT88-202ENST00000351808 KIR2DL5BA0A0G2JN68 375 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 KIR2DL5BA0A0G2JPC4 375 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 CLDN34H7C241 214 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 CNOT4O95628 575 aaKnown RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 TIMP1P01033 207 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 CHRM2P08172 466 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 RPS2P15880 293 aaKnown RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 ACAA2P42765 397 aaKnown RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 ALDH3B1P43353 468 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 ASCL1P50553 236 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 ID2Q02363 134 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 CEBPEQ15744 281 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 TMEM176BQ3YBM2 270 aaPredicted RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 ULK3Q6PHR2 472 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 SPSB3Q6PJ21 355 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 RTN4RL1Q86UN2 441 aaPredicted RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 KIR2DL5AQ8N109 375 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 LRRC25Q8N386 305 aaPredicted RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 GAL3ST2Q9H3Q3 398 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 VAX2Q9UIW0 290 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 IGFBP3P17936 291 aaPredicted RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 SOX8P57073 446 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 UNC119Q13432 240 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms