RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 AKR7LQ8NHP1 331 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 UBASH3BQ8TF42 649 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 AKAP1Q92667 903 aaKnown RBP eCLIP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 ITFG2Q969R8 447 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 FAM46BQ96A09 425 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 SPSB4Q96A44 273 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 PHF21AQ96BD5 680 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 APH1AQ96BI3 265 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 C1QTNF5Q9BXJ0 243 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 PRDM14Q9GZV8 571 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 LPAR5Q9H1C0 372 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 DEFB127Q9H1M4 99 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 CALHM2Q9HA72 323 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 MOV10Q9HCE1 1003 aaKnown RBP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 MRPL15Q9P015 296 aaKnown RBP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 GHRLQ9UBU3 117 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF391Q9UJN7 358 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 ANAPC10Q9UM13 185 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 MRPS28Q9Y2Q9 187 aaKnown RBP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 N6AMT1Q9Y5N5 214 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 KIAA1549Q9HCM3 1950 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 RELNP78509 3460 aa6.02□□□□□ -1.44
TRIM55-203ENST00000350034 MED13Q9UHV7 2174 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 TRAV6A0A075B6T7 132 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 A0A0A6YYD4 124 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 A0A1B0GUH1 482 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 hCG_38984A0A1B0GV85 526 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FOXI3A8MTJ6 420 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF587BE7ETH6 402 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 AQP7O14520 342 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ICMTO60725 284 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 PRAF2O60831 178 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 PEX14O75381 377 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 TGM6O95932 706 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 IL5P05113 134 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 CHRM2P08172 466 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FAHP16930 419 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ACKR3P25106 362 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 MPZP25189 248 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 AGTR1P30556 359 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FAUP35544 74 aaKnown RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 OR3A4PP47883 348 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FOXG1P55316 489 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 RAB25P57735 213 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ACTBP60709 375 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ZP1P60852 638 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ACTG1P63261 375 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 GUSBP1Q15486 140 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 OR8B8Q15620 311 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FAM189A2Q15884 450 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 PCGF3Q3KNV8 242 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 LINC00303Q3SY05 128 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 PABPC1L2AQ5JQF8 200 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 CD276Q5ZPR3 534 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 AWAT2Q6E213 333 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 SFRP4Q6FHJ7 346 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 GLIPR1L1Q6UWM5 242 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 IGFL3Q6UXB1 125 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 SEZ6L2Q6UXD5 910 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ASCL4Q6XD76 172 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 CHMP1BQ7LBR1 199 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FGD2Q7Z6J4 655 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 DPPA2Q7Z7J5 298 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FAM89BQ8N5H3 189 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 CPEB3Q8NE35 698 aaKnown RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 SEMA6DQ8NFY4 1073 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 OR4C16Q8NGL9 310 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 KCNG3Q8TAE7 436 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 SPSB1Q96BD6 273 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF486Q96H40 463 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 MED30Q96HR3 178 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 REEP6Q96HR9 211 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 FYTTD1Q96QD9 318 aaKnown RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 PRRG4Q9BZD6 226 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 C20orf85Q9H1P6 137 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 OR51J1Q9H342 316 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 LDAHQ9H6V9 325 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 NEK6Q9HC98 313 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 RANGRFQ9HD47 186 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 NPDC1Q9NQX5 325 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-203ENST00000350034 CLCF1Q9UBD9 225 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 POU2F3Q9UKI9 436 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 PIGLQ9Y2B2 252 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 KCNMB2Q9Y691 235 aa6.02□□□□□ -1.45
TRIM55-203ENST00000350034 PHF3Q92576 2039 aaKnown RBP6.01□□□□□ -1.45
TRIM55-203ENST00000350034 LOC100509620A0A075B734 347 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF503-AS2A6NEH8 195 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 SLC22A20A6NK97 555 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 A8MV72 311 aaPredicted RBP6.01□□□□□ -1.45
TRIM55-203ENST00000350034 XRCC2O43543 280 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 CDC14BO60729 498 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 SS18L1O75177 396 aaPredicted RBP6.01□□□□□ -1.45
TRIM55-203ENST00000350034 IL18BPO95998 194 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 IGHV3-9P01782 118 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 LCATP04180 440 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 HCKP08631 526 aa6.01□□□□□ -1.45
TRIM55-203ENST00000350034 GSTP1P09211 210 aaKnown RBP6.01□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF735P0CB33 412 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms