RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ZNF724A8MTY0 619 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SCGNO76038 276 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 MPIG6BO95866 241 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 CYB5AP00167 134 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 MMP7P09237 267 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ANXA7P20073 488 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 RAD52P43351 418 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 FAPQ12884 760 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 C9orf135Q5VTT2 229 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 METTL11BQ5VVY1 283 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 CRIP3Q6Q6R5 217 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 CHMP1BQ7LBR1 199 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SLC7A5P1Q8MH63 180 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TMEM229BQ8NBD8 167 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 OR5D18Q8NGL1 313 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 KCNG3Q8TAE7 436 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 REEP6Q96HR9 211 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TMEM246Q9BRR3 403 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 GINS4Q9BRT9 223 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 LPAR5Q9H1C0 372 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PLSCR3Q9NRY6 295 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 KLK13Q9UKR3 277 aa12.32□□□□□ -0.44
CDK5RAP1-202ENST00000346416 A0A1W2PP11 408 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PYCARD-AS1I3L0S3 204 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 CDC14BO60729 498 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ALX3O95076 343 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SULT1A3P0DMM9 295 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SULT1A4P0DMN0 295 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ACKR3P25106 362 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 RNPS1Q15287 305 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 GLDNQ6ZMI3 551 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PNLDC1Q8NA58 520 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 FDCSPQ8NFU4 85 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SEMA6DQ8NFY4 1073 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 OR10R2Q8NGX6 335 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SEC22CQ9BRL7 303 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 BANF2Q9H503 90 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 RNF122Q9H9V4 155 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TRGV5A0A0B4J1U4 118 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ZNF587BE7ETH6 402 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 RPL36A-HNRNPH2H7BZ11 118 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 FABP7O15540 132 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 RAB3DO95716 219 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 MELTFP08582 738 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 UBBP0CG47 229 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ANXA3P12429 323 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 GNB3P16520 340 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PTGFRP43088 359 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 GSK3AP49840 483 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 MECP2P51608 486 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SLC22A6Q4U2R8 563 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PABPC1L2AQ5JQF8 200 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 IGF2-ASQ6U949 168 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 FJX1Q86VR8 437 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 MCEMP1Q8IX19 187 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 APH1AQ96BI3 265 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TMEM59Q9BXS4 323 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ZDHHC11Q9H8X9 412 aa12.31□□□□□ -0.44
CDK5RAP1-202ENST00000346416 A0A096LPE4 126 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 A0A0A6YYD4 124 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 A0A1W2PPZ6 126 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 DHRS7CA6NNS2 312 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ZNF736B4DX44 427 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 M0QYG6 137 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 CRTAPO75718 401 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 CHRM2P08172 466 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 FCGR2AP12318 317 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PRSS12P56730 875 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 C1QL2Q7Z5L3 287 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TRAPPC6BQ86SZ2 158 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 RTN4RL2Q86UN3 420 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ZNF584Q8IVC4 421 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 CPEB3Q8NE35 698 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ZFAND1Q8TCF1 268 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 NUDCD2Q8WVJ2 157 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PIGTQ969N2 578 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 MED30Q96HR3 178 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TINAGL1Q9GZM7 467 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 SPRR3Q9UBC9 169 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 UPB1Q9UBR1 384 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 ZNF107Q9UII5 783 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
CDK5RAP1-202ENST00000346416 PMP22Q01453 160 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 RIPPLY1Q0D2K3 151 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 TNK1Q13470 666 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 OR4S1Q8NGB4 309 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 GRPEL2Q8TAA5 225 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 WDYHV1Q96HA8 205 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 DOCK7Q96N67 2140 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 GON7Q9BXV9 100 aa12.29□□□□□ -0.44
CDK5RAP1-202ENST00000346416 NPDC1Q9NQX5 325 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms