RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 OR1B1Q8NGR6 318 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 OXGR1Q96P68 337 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 DIMT1Q9UNQ2 313 aaKnown RBP10.64□□□□□ -0.71
SHANK2-201ENST00000338508 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
SHANK2-201ENST00000338508 IGKV6D-21A0A0A0MT36 114 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 EIF4E2O60573 245 aaKnown RBP10.64□□□□□ -0.71
SHANK2-201ENST00000338508 MGPP08493 103 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 LYZP61626 148 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 HOXA4Q00056 320 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-201ENST00000338508 ZNF766Q5HY98 468 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 TRNP1Q6NT89 227 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 OR2A14Q96R47 310 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 C20orf27Q9GZN8 174 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 PARD6AQ9NPB6 346 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 LAMP3Q9UQV4 416 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 FGF17O60258 216 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 FCGR3BO75015 233 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 GPANK1O95872 356 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 OR5D13Q8NGL4 314 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 SMOC1Q9H4F8 434 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 SULT1A1P50225 295 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
SHANK2-201ENST00000338508 SPRED3Q2MJR0 410 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 PAQR6Q6TCH4 344 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 OSR2Q8N2R0 312 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 ELSPBP1Q96BH3 223 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 LYRM4Q9HD34 91 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 R4GN57 208 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 JTBO76095 146 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 KLKB1P03952 638 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 RPS19P39019 145 aaKnown RBP10.64□□□□□ -0.71
SHANK2-201ENST00000338508 OR4F17Q8NGA8 305 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 OR5A2Q8NGI9 324 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 LINC00052Q96N35 136 aa10.64□□□□□ -0.71
SHANK2-201ENST00000338508 OR1C1Q15619 314 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 ETFDHQ16134 617 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 SP6Q3SY56 376 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 RBPMS2Q6ZRY4 209 aaKnown RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 KMT5CQ86Y97 462 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 ARL6IP6Q8N6S5 226 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 CLDN23Q96B33 292 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 NOL4LQ96MY1 436 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 CXCL16Q9H2A7 254 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 ZNF318Q5VUA4 2279 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 DSCR3O14972 297 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 LYZL6O75951 148 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 SELENBP1Q13228 472 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 PYCR3Q53H96 274 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 FFAR4Q5NUL3 377 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 ZNF764Q96H86 408 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 TXLNGYQ9BZA5 131 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 TRAPPC1Q9Y5R8 145 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 TPRP12270 2363 aaKnown RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 SIGLEC1Q9BZZ2 1709 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 CCDC187A0A096LP49 1063 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 A0A0A6YYJ9 748 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 HSBP1O75506 76 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 FBP1P09467 338 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 SPI1P17947 270 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 CCR9P51686 369 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 OR2F1Q13607 317 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 SHBQ15464 509 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 DUSP6Q16828 381 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 MICBQ29980 383 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 DYNLRB2Q8TF09 96 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 SCARB1Q8WTV0 552 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 MS4A6EQ96DS6 147 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 ZNF768Q9H5H4 540 aaKnown RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 A0A1B0GTQ1 180 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 ACSM4P0C7M7 580 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 CEACAM16Q2WEN9 425 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 VMA21Q3ZAQ7 101 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 FNDC7Q5VTL7 733 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 CHRDL1Q9BU40 450 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 TMEM140Q9NV12 185 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 GDF2Q9UK05 429 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 CA6P23280 308 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 AGERQ15109 404 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 RTL10Q7L3V2 364 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 PTRH1Q86Y79 214 aaKnown RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 FBXL6Q8N531 539 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 C16orf52Q8NHV5 167 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 TAS2R60P59551 318 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 GGTA1PQ4G0N0 100 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 AGBL4Q5VU57 503 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 SLC36A1Q7Z2H8 476 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 PDLIM5Q96HC4 596 aaKnown RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 EAF1Q96JC9 268 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 WDR61Q9GZS3 305 aaKnown RBP10.63□□□□□ -0.71
SHANK2-201ENST00000338508 PPIL1Q9Y3C6 166 aa10.63□□□□□ -0.71
SHANK2-201ENST00000338508 DNAJC25-GNG10A0A024R161 153 aa10.62□□□□□ -0.71
SHANK2-201ENST00000338508 HELTA6NFD8 242 aa10.62□□□□□ -0.71
SHANK2-201ENST00000338508 TMEM189-UBE2V1I3L0A0 370 aa10.62□□□□□ -0.71
SHANK2-201ENST00000338508 OR52N4Q8NGI2 321 aa10.62□□□□□ -0.71
SHANK2-201ENST00000338508 OR4D10Q8NGI6 311 aa10.62□□□□□ -0.71
SHANK2-201ENST00000338508 GNPNAT1Q96EK6 184 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-201ENST00000338508 ASB16Q96NS5 453 aa10.62□□□□□ -0.71
SHANK2-201ENST00000338508 DAPP1Q9UN19 280 aa10.62□□□□□ -0.71
SHANK2-201ENST00000338508 C9orf172C9J069 976 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms