RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 EPXP11678 715 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 KHDC1LQ5JSQ8 128 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 DGAT2L6Q6ZPD8 337 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 RBMXL1Q96E39 390 aaKnown RBP13.38□□□□□ -0.27
C9orf47-201ENST00000334490 ZNF391Q9UJN7 358 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 LOC285556D6RIA3 1793 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 ZFPL1O95159 310 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 C10orf111Q8N326 155 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 ABHD3Q8WU67 409 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 NARFLQ9H6Q4 476 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 SLC17A2O00624 439 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 ARL3P36405 182 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 LYSMD2Q8IV50 215 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 TMEM217Q8N7C4 229 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 UCN2Q96RP3 112 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 MYO16Q9Y6X6 1858 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 IGHA2P01877 340 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 ANKRD34CP0C6C1 535 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 OR5H8P0DN80 308 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 FCN2Q15485 313 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 RHOUQ7L0Q8 258 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 SSX9Q7RTT3 188 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 CELF2-AS1Q8N7Q2 184 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 RBMXL3Q8N7X1 1067 aaKnown RBP13.37□□□□□ -0.27
C9orf47-201ENST00000334490 FAM181AQ8N9Y4 354 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 TRPM7Q96QT4 1865 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 ANXA7P20073 488 aaKnown RBP13.37□□□□□ -0.27
C9orf47-201ENST00000334490 SELENOPP49908 381 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 CLINT1Q14677 625 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 MICBQ29980 383 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 RBMS3Q6XE24 437 aaKnown RBP13.37□□□□□ -0.27
C9orf47-201ENST00000334490 FLVCR1Q9Y5Y0 555 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 A0A1B0GTH9 108 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
C9orf47-201ENST00000334490 NTN1O95631 604 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 S100A7P31151 101 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 FCGR2CP31995 323 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 SLC25A35Q3KQZ1 300 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 SLC36A1Q7Z2H8 476 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 A0A0B4J2A0 478 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 FFAR1O14842 300 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 NDUFB3O43676 98 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 DHRS3O75911 302 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 LIMS3P0CW19 117 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 LIMS4P0CW20 117 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 RAB4BP61018 213 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 DYNC2LI1Q8TCX1 351 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 PAQR8Q8TEZ7 354 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 ZNF486Q96H40 463 aaPredicted RBP13.37□□□□□ -0.27
C9orf47-201ENST00000334490 POFUT1Q9H488 388 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 ADGRL4Q9HBW9 690 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 SHPKQ9UHJ6 478 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 FOXJ3Q9UPW0 622 aa13.37□□□□□ -0.27
C9orf47-201ENST00000334490 TRAV1-2A0A0B4J238 106 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 EIF4EP06730 217 aaKnown RBP13.36□□□□□ -0.27
C9orf47-201ENST00000334490 SFTPCP11686 197 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 EVX1P49640 407 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 BTLAQ7Z6A9 289 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 CCL17Q92583 94 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 F8W036 122 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 KLF3P57682 345 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-201ENST00000334490 TAS2R30P59541 319 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 TMEM200AQ86VY9 491 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 CLDN23Q96B33 292 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 AQP7P3A6NL99 342 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 SIX6O95475 246 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 CD3EP07766 207 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 BAXQ07812 192 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 LRRC10Q5BKY1 277 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 OR51A4Q8NGJ6 313 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 ASB10Q8WXI3 467 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 YIPF6Q96EC8 236 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 SCARF2Q96GP6 870 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-201ENST00000334490 SLC26A1Q9H2B4 701 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 PI3P19957 117 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 PPP1CBP62140 327 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 NKX6-1P78426 367 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-201ENST00000334490 LINC00299Q6ZSB3 139 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 ARHGEF39Q8N4T4 335 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 TTTY12Q9BZ98 90 aa13.36□□□□□ -0.27
C9orf47-201ENST00000334490 TRGV10A0A0A0MS01 117 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 A0A0D9SG52 128 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 TRIM64CA6NLI5 447 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 FUT3P21217 361 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 KISS1Q15726 138 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 CSRP2Q16527 193 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 RFPL4BQ6ZWI9 263 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 C17orf47Q8NEP4 570 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 ST8SIA4Q92187 359 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 KIAA1456Q9P272 454 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 RNF150Q9ULK6 438 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 HS3ST3B1Q9Y662 390 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 OIP5O43482 229 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 PRDX4Q13162 271 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 HFEQ30201 348 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 NUFIP2Q7Z417 695 aaKnown RBP13.35□□□□□ -0.27
C9orf47-201ENST00000334490 HPSE2Q8WWQ2 592 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 EDARADDQ8WWZ3 215 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms