RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 ANGPTL5Q86XS5 388 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 ZNF101Q8IZC7 436 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 METTL21AQ8WXB1 218 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 ADAT3Q96EY9 351 aaPredicted RBP11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 PPP4R1LQ9P1A2 415 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 COA3Q9Y2R0 106 aaPredicted RBP11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 CBY1Q9Y3M2 126 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 SPACA6W5XKT8 324 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 MYO7BQ6PIF6 2116 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 PRH1P02810 166 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 MPZP25189 248 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 EMP2P54851 167 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 IL15RAQ13261 267 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 PCK2Q16822 640 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 WBP2NLQ6ICG8 309 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 REC114Q7Z4M0 266 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 OR1J1Q8NGS3 322 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 OR13G1Q8NGZ3 307 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 RERGQ96A58 199 aaPredicted RBP11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 NTNG2Q96CW9 530 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 POM121Q96HA1 1249 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 LMF2Q9BU23 707 aaKnown RBP11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 LYRM4Q9HD34 91 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 KCNJ16Q9NPI9 418 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 OR52A1Q9UKL2 312 aa11.94□□□□□ -0.5
CCDC88C-201ENST00000331194 A0A087X0M5 115 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 TMEM269A0A1B0GVZ9 245 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 A0A1B0GX30 115 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 GLI4P10075 376 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 BCKDHBP21953 392 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 CAMLGP49069 296 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 QRFPP83859 136 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 BIKQ13323 160 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 MED25Q71SY5 747 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 PRR22Q8IZ63 422 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 LYPD6BQ8NI32 183 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 MALSU1Q96EH3 234 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 G6PC3Q9BUM1 346 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 HDAC8Q9BY41 377 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 WFDC1Q9HC57 220 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 Q9N2J8 555 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 G6PC2Q9NQR9 355 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 ZNF726A6NNF4 738 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 H0Y8X5 98 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 ZNF205O95201 554 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 MPIG6BO95866 241 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 SLC35E2P0CK97 266 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 CD37P11049 281 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 HIST1H1BP16401 226 aaKnown RBP11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 TAS2R31P59538 309 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 FMODQ06828 376 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 PSRC1Q6PGN9 363 aaPredicted RBP11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 METTL27Q8N6F8 245 aaPredicted RBP11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 WFIKKN2Q8TEU8 576 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 TSACCQ96A04 125 aaPredicted RBP11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 KIR3DX1Q9H7L2 352 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 LMAN1LQ9HAT1 526 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 PARPBPQ9NWS1 579 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 HS3ST3B1Q9Y662 390 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 A0A0A6YYH2 397 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 PRSS37A4D1T9 235 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 A6NJ64 397 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 KLK2P20151 261 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 SERPINA2P20848 420 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 GAB4Q2WGN9 574 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 C4orf17Q53FE4 359 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 RPUSD3Q6P087 351 aaKnown RBP11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 DCXRQ7Z4W1 244 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 HSD17B11Q8NBQ5 300 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 YPEL4Q96NS1 127 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 ZFYVE21Q9BQ24 234 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 ATG101Q9BSB4 218 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 CNTNAP3Q9BZ76 1288 aa11.93□□□□□ -0.5
CCDC88C-201ENST00000331194 TGIF2-C20orf24A0A0A6YYL0 155 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 PRR19A6NJB7 356 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 XRCC2O43543 280 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 NUDT21O43809 227 aaKnown RBP11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 MBP02144 154 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 SNRPCP09234 159 aaKnown RBP11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 HLA-DOBP13765 273 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 FABP4P15090 132 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 FSTP19883 344 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 DDTP30046 118 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 IGFALSP35858 605 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 CCL20P78556 96 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 HMGN3Q15651 99 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 AADACL3Q5VUY0 350 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 WDFY1Q8IWB7 410 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 Q8WTZ3 238 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 DNAJB11Q9UBS4 358 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 MEGF11A6BM72 1044 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 HIST1H2BKO60814 126 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 HIST1H2BJP06899 126 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 RPS2P15880 293 aaKnown RBP11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 ZNF10P21506 573 aaPredicted RBP11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 HIST1H2BOP23527 126 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 HIST1H2BBP33778 126 aa11.92□□□□□ -0.5
CCDC88C-201ENST00000331194 TMEM50BP56557 158 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms