RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 LGI3Q8N145 548 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 OR10V1Q8NGI7 309 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 COX14Q96I36 57 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 MAGT1Q9H0U3 335 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 IFITM5A6NNB3 132 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 DVL1O14640 695 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 IGHV3-13P01766 116 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 IGHV3-7P01780 117 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 DVL1P1P54792 670 aaPredicted RBP9.14□□□□□ -0.95
CHD3-201ENST00000330494 SOHLH1Q5JUK2 328 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 CBLN3Q6UW01 205 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 FAM173AQ9BQD7 235 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 POLDIP2Q9Y2S7 368 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 ALG1L2C9J202 215 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 PRR35P0CG20 571 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 PCBP4P57723 403 aaKnown RBP9.14□□□□□ -0.95
CHD3-201ENST00000330494 MLF1P58340 268 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 RGS7BPQ6MZT1 257 aaPredicted RBP9.14□□□□□ -0.95
CHD3-201ENST00000330494 TMEM88Q6PEY1 159 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 OR6K3Q8NGY3 331 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 CT55Q8WUE5 264 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 UHRF2Q96PU4 802 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 FOXB1Q99853 325 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 ARV1Q9H2C2 271 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 RBBP6Q7Z6E9 1792 aaKnown RBP9.14□□□□□ -0.95
CHD3-201ENST00000330494 HEXAP06865 529 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 GNG10P50151 68 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 NXPH1P58417 271 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 DTWD2Q8NBA8 298 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 OR2G3Q8NGZ4 309 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 C20orf202A1L168 122 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 ABCD4O14678 606 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 OR2C1O95371 312 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 CHRM2P08172 466 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 NKX2-1P43699 371 aaPredicted RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 MSRB3Q8IXL7 192 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 FBXW5Q969U6 566 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 JAM3Q9BX67 310 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 SLCO5A1Q9H2Y9 848 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 ACER2Q5QJU3 275 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 ZNF596Q8TC21 504 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 PHYHIPQ92561 330 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 YIPF5Q969M3 257 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 HES7Q9BYE0 225 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 MOB1AQ9H8S9 216 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 DNAJB12Q9NXW2 375 aaKnown RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 CLEC1BQ9P126 229 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 ZNF391Q9UJN7 358 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 COLQQ9Y215 455 aaPredicted RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 GPR37O15354 613 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 SOX15O60248 233 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 EPHA8P29322 1005 aaPredicted RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 IL11RAQ14626 422 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 WDR88Q6ZMY6 472 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 VN1R4Q7Z5H5 301 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 TMEM231Q9H6L2 316 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 OSGIN2Q9Y236 505 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 RP1P56715 2156 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 SPNP16150 400 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 GALNSP34059 522 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 RPS23P62266 143 aaKnown RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 GTF2H5Q6ZYL4 71 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 OR4D9Q8NGE8 314 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 CMBLQ96DG6 245 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 YIPF6Q96EC8 236 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 TMEM43Q9BTV4 400 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 ONECUT1Q9UBC0 465 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 MTCH2Q9Y6C9 303 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 OR5H15A6NDH6 313 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 FABP1P07148 127 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 TGM1P22735 817 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 TIAL1Q01085 375 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHD3-201ENST00000330494 ADIRFQ15847 76 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 TMEM268Q5VZI3 342 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 FAM103A1Q9BTL3 118 aaKnown RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 OR6C68A6NDL8 312 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 HPNP05981 417 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 MGMTP16455 207 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 SLC51BQ86UW2 128 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 KCNRGQ8N5I3 272 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 TMEM104Q8NE00 496 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 MRPS24Q96EL2 167 aaKnown RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 GABRG3Q99928 467 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 SLC25A21Q9BQT8 299 aaPredicted RBP9.13□□□□□ -0.95
CHD3-201ENST00000330494 TNFRSF19Q9NS68 423 aa9.13□□□□□ -0.95
CHD3-201ENST00000330494 DEFB108AA8MXU0 73 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 XRCC2O43543 280 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 HOXC8P31273 242 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 ZNF774Q6NX45 483 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 ZFP62Q8NB50 900 aaPredicted RBP9.12□□□□□ -0.95
CHD3-201ENST00000330494 DYNC2LI1Q8TCX1 351 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 TTC9Q92623 222 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 NIPSNAP3BQ9BS92 247 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 MMP25Q9NPA2 562 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 A0A0B4J2E0 115 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 A0A1B0GX12 115 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 RAF1P04049 648 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 CNR1P21554 472 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 CA6P23280 308 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms