RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 BATF2Q8N1L9 274 aa15.29■□□□□ 0.04
SMCHD1-201ENST00000320876 C17orf78Q8N4C9 275 aa15.29■□□□□ 0.04
SMCHD1-201ENST00000320876 ZDHHC22Q8N966 263 aa15.29■□□□□ 0.04
SMCHD1-201ENST00000320876 FCN1O00602 326 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 Q6ZN92 141 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 MENTQ9BUN1 341 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 LAT2Q9GZY6 243 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 TXNIPQ9H3M7 391 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 MLF2Q15773 248 aaPredicted RBP15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 CDCP1Q9H5V8 836 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 ISG20L2Q9H9L3 353 aaKnown RBP15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 RPL18Q07020 188 aaKnown RBP15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.28■□□□□ 0.043e-7■■■■■ 56.5
SMCHD1-201ENST00000320876 KCNE4Q8WWG9 221 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 P2RY12Q9H244 342 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 OCEL1Q9H607 264 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 ALOX12BO75342 701 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 SLC2A10O95528 541 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 SMIM6P0DI80 62 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 NTNG2Q96CW9 530 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 FAAP24Q9BTP7 215 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 STUMQ69YW2 141 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 CAMKMTQ7Z624 323 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 A0A087X0M5 115 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 A0A1B0GX30 115 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 A0A1W2PNV4 684 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 PYCARD-AS1I3L0S3 204 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 ASTLQ6HA08 431 aaPredicted RBP15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 ACSM5Q6NUN0 579 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 PAQR6Q6TCH4 344 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 OR5V1Q9UGF6 321 aa15.28■□□□□ 0.04
SMCHD1-201ENST00000320876 S100A4P26447 101 aaKnown RBP15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 ZNF346Q9UL40 294 aaKnown RBP15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 FAHD1Q6P587 224 aa15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 PLSCR3Q9NRY6 295 aa15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 PMS2P1A4D2B8 440 aa15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 CA3P07451 260 aa15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 FPR2P25090 351 aa15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 HAAOP46952 286 aa15.27■□□□□ 0.04
SMCHD1-201ENST00000320876 TMEM241Q24JQ0 296 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF750Q32MQ0 723 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 FDX2Q6P4F2 183 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 OSR2Q8N2R0 312 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 PI3P19957 117 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 CD200P41217 278 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 MYLKQ15746 1914 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 H3BNC9 293 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 PGA3P0DJD8 388 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 GALP22466 123 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 IRS1P35568 1242 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 AFMIDQ63HM1 303 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 FAM210BQ96KR6 192 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 EMC6Q9BV81 110 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 SNRPEP62304 92 aaKnown RBP15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 SELENBP1Q13228 472 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 CLN3Q13286 438 aa15.27■□□□□ 0.03
SMCHD1-201ENST00000320876 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 SLC39A11Q8N1S5 342 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OPN1MWP04001 364 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OPN1MW2P0DN77 364 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OPN1MW3P0DN78 364 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 CLEC12BQ2HXU8 276 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF687Q8N1G0 1237 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 TARM1B6A8C7 271 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 ORM1P02763 201 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OR2A2Q6IF42 318 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 SPICQ8N5J4 248 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 FGF20Q9NP95 211 aaPredicted RBP15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 TRAPPC4Q9Y296 219 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 TMED3Q9Y3Q3 217 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 TCRBV5S2A0A599 114 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 PPOXP50336 477 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF121P58317 390 aaPredicted RBP15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF385BQ569K4 471 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 ZC3HAV1LQ96H79 300 aaKnown RBP15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 SEC11CQ9BY50 192 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 MANBALQ9NQG1 85 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 A6NDN8 102 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OR5AL1P0C617 328 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 FAM78AQ5JUQ0 283 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OR2W3Q7Z3T1 314 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 CCDC190Q86UF4 302 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 PLPP6Q8IY26 295 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 MS4A6EQ96DS6 147 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 KLK11Q9UBX7 282 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 SCN7AQ01118 1682 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 AP4M1O00189 453 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 CD22P20273 847 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 SLC26A10Q8NG04 563 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OR5M1Q8NGP8 315 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 TMEM37Q8WXS4 190 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 CLDN23Q96B33 292 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 PELI1Q96FA3 418 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 OR10C1Q96KK4 312 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 SMIM14Q96QK8 99 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 WSB1Q9Y6I7 421 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 GYPAP02724 150 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 LINC00303Q3SY05 128 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 GPR137Q96N19 417 aa15.26■□□□□ 0.03
SMCHD1-201ENST00000320876 A0A1B0GTQ1 180 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms