RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 WDR82Q6UXN9 313 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 AMIGO2Q86SJ2 522 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 OR1M1Q8NGA1 313 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 FAM216AQ8WUB2 273 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 HPSE2Q8WWQ2 592 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 PGAM5Q96HS1 289 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 SUCNR1Q9BXA5 334 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 CLN8Q9UBY8 286 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 SRSF10O75494 262 aaKnown RBP16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 MRPL3P09001 348 aaKnown RBP16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 AMY2BP19961 511 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 CFL1P23528 166 aaKnown RBP16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 COMPP49747 757 aaPredicted RBP16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 RPS7P62081 194 aaKnown RBP16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 GFOD2Q3B7J2 385 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 ARMCX4Q5H9R4 360 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 FAM76BQ5HYJ3 339 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 DEGS2Q6QHC5 323 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 ASRGL1Q7L266 308 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 DOK3Q7L591 496 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 NLRC3Q7RTR2 1065 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 PLEKHA8Q96JA3 519 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 NUDT16L1Q9BRJ7 211 aaKnown RBP16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 MRI1Q9BV20 369 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 NIPAL2Q9H841 368 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 RNPEPL1Q9HAU8 725 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 C14orf119Q9NWQ9 140 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 KIF17Q9P2E2 1029 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 AP4S1Q9Y587 144 aa16.46■□□□□ 0.23
PDZRN3-202ENST00000308537 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 A0A1B0GW55 424 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 G3V2T6 193 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 PSMD9O00233 223 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 CST4P01036 141 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4L2P0CJ85 424 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4L3P0CJ86 424 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4L4P0CJ87 422 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4L5P0CJ88 424 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4L6P0CJ89 424 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4L7P0CJ90 424 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 FASP25445 335 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 CFHR2P36980 270 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4L9Q6RFH8 374 aaPredicted RBP16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 C9orf139Q6ZV77 190 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 GALNT4Q8N4A0 578 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 BPIFB2Q8N4F0 458 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 SIGLECL1Q8N7X8 197 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 BOLLQ8N9W6 283 aaKnown RBP16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 CSNK2A3Q8NEV1 391 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 SEH1LQ96EE3 360 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 OR8B4Q96RC9 309 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 ADGRL4Q9HBW9 690 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 KRT84Q9NSB2 600 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 KAAG1Q9UBP8 84 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 DUX4Q9UBX2 424 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 LAMP5Q9UJQ1 280 aa16.45■□□□□ 0.22
PDZRN3-202ENST00000308537 TMEM89A2RUT3 159 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 A6NLC8 198 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 SRRM5B3KS81 715 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 GYPAP02724 150 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 FCGR1AP12314 374 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 MMP9P14780 707 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 DCTDP32321 178 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 POLR2IP36954 125 aaKnown RBP16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 UBA52P62987 128 aaKnown RBP16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 MEPCEQ7L2J0 689 aaKnown RBP16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 C10orf67Q8IYJ2 551 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 FGFRL1Q8N441 504 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 TCEANCQ8N8B7 351 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 OR8S1Q8NH09 359 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 TMEM163Q8TC26 289 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 OR5P3Q8WZ94 311 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 PPP1R14AQ96A00 147 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 CIB1Q99828 191 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 PAPOLGQ9BWT3 736 aaKnown RBP16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 TEX12Q9BXU0 123 aa16.44■□□□□ 0.22
PDZRN3-202ENST00000308537 IGHV3OR15-7A0A075B7D8 119 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 IGHV3OR16-10A0A075B7F0 116 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 TRAV38-1A0A0B4J264 116 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 A0A0U1RQV5 110 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 ADAM20O43506 726 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 FPR2P25090 351 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 NPY4RP50391 375 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 MFGE8Q08431 387 aaPredicted RBP16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 MZT1Q08AG7 82 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 POU4F2Q12837 409 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 PRDX4Q13162 271 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 NXNL2Q5VZ03 156 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 BTNL3Q6UXE8 466 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 KRT77Q7Z794 578 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 ZDHHC13Q8IUH4 622 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 ZNF679Q8IYX0 411 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 LRRC29Q8WV35 223 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 JMJD8Q96S16 334 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 TTTY10Q9BZA0 68 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 RASSF4Q9H2L5 321 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 HAO2Q9NYQ3 351 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 ZNF391Q9UJN7 358 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms