RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CRYABP02511 175 aaKnown RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 MT-ND4LP03901 98 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 OR13C7P0DN81 318 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 RAB1AP62820 205 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 FMODQ06828 376 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 HABP2Q14520 560 aaPredicted RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 OR1J1Q8NGS3 322 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 TSPAN32Q96QS1 320 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 PARP12Q9H0J9 701 aaKnown RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 SLC25A32Q9H2D1 315 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 OR6C68A6NDL8 312 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 K7EQM0 130 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 CT62P0C5K7 136 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 GSG1Q2KHT4 349 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 TOR2AQ5JU69 321 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 DRAM2Q6UX65 266 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 SPRED2Q7Z698 418 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 ADGRL4Q9HBW9 690 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 FAM60AQ9NP50 221 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 SLC17A5Q9NRA2 495 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 PLXNB2O15031 1838 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 TRGV8A0A0C4DH27 118 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 KIR2DL1P43626 348 aaPredicted RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 NPBWR1P48145 328 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 RAB13P51153 203 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 EIF4EBP2Q13542 120 aaPredicted RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 RNPS1Q15287 305 aaKnown RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 ZNF766Q5HY98 468 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 DHRS13Q6UX07 377 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 TMED6Q8WW62 240 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 TRAPPC4Q9Y296 219 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 NRXN2Q9P2S2 1712 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 OIP5O43482 229 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 ADH4P08319 380 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 MGST1P10620 155 aaKnown RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 SSPNQ14714 243 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 BATFQ16520 125 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 ACER2Q5QJU3 275 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 GLCCI1Q86VQ1 547 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 CORO2AQ92828 525 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 NRTNQ99748 197 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 RNF32Q9H0A6 362 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 STRAPQ9Y3F4 350 aaKnown RBP14.29□□□□□ -0.12
USP42-201ENST00000306177 RGPD4Q7Z3J3 1758 aa14.29□□□□□ -0.12
USP42-201ENST00000306177 LIMS3P0CW19 117 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 LIMS4P0CW20 117 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 CRYBB2P43320 205 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 LINC00303Q3SY05 128 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 H3F3CQ6NXT2 135 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 DEGS2Q6QHC5 323 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 EDARADDQ8WWZ3 215 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 PLEKHB1Q9UF11 243 aaPredicted RBP14.28□□□□□ -0.12
USP42-201ENST00000306177 ZNF391Q9UJN7 358 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 NUP214P35658 2090 aaPredicted RBP14.28□□□□□ -0.12
USP42-201ENST00000306177 FXNQ16595 210 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 FAM74A1Q5RGS3 127 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 C1orf210Q8IVY1 113 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 ARRDC1Q8N5I2 433 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 OR10P1Q8NGE3 313 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 C4orf45Q96LM5 186 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 TRPM6Q9BX84 2022 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 NME2P1O60361 137 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 GPM6AP51674 278 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 RHBDD2Q6NTF9 364 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 THNSL2Q86YJ6 484 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 CDH26Q8IXH8 852 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 MTCH2Q9Y6C9 303 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 ZNF724A8MTY0 619 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 EPPINO95925 133 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 GUCA2AQ02747 115 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 LAMP3Q9UQV4 416 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 TFF2Q03403 129 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 DMRTC1Q5HYR2 192 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 OR2W3Q7Z3T1 314 aa14.28□□□□□ -0.12
USP42-201ENST00000306177 ATG2BQ96BY7 2078 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.12
USP42-201ENST00000306177 ANGPTL7O43827 346 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 ZFPL1O95159 310 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 EMP3P54852 163 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 TMEM41BQ5BJD5 291 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 SPATA46Q5T0L3 261 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 SLC38A6Q8IZM9 456 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 CIB3Q96Q77 187 aaPredicted RBP14.27□□□□□ -0.12
USP42-201ENST00000306177 UQCC2Q9BRT2 126 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 RNF150Q9ULK6 438 aa14.27□□□□□ -0.12
USP42-201ENST00000306177 FZD5Q13467 585 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 MRPS24Q96EL2 167 aaKnown RBP14.27□□□□□ -0.13
USP42-201ENST00000306177 LRRC3BQ96PB8 259 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 DOK1Q99704 481 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 OCEL1Q9H607 264 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 ZFP64Q9NPA5 681 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 KIAA1456Q9P272 454 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 FUT3P21217 361 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 DBPQ10586 325 aaPredicted RBP14.27□□□□□ -0.13
USP42-201ENST00000306177 C9orf152Q5JTZ5 239 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 TAAR6Q96RI8 345 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 ZNF416Q9BWM5 594 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 PATZ1Q9HBE1 687 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms