RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 FLVCR2Q9UPI3 526 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 SCN5AQ14524 2016 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 ZC3H12DA2A288 527 aaKnown RBP12.18□□□□□ -0.46
TRIM56-201ENST00000306085 HCRTR1O43613 425 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 HIST3H3Q16695 136 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF260Q3ZCT1 412 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 CMTM4Q8IZR5 234 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 OR4S1Q8NGB4 309 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 DTD2Q96FN9 168 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 SLC7A10Q9NS82 523 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 A0A1B0GWA3 101 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 B4E171 279 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 TPBGQ13641 420 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 MAP6Q96JE9 813 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 FAM210BQ96KR6 192 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 HSD17B10Q99714 261 aaKnown RBP12.18□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF737O75373 536 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 SFTPA2Q8IWL1 248 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 SFTPA1Q8IWL2 248 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 CARFQ8N187 725 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 ASB13Q8WXK3 278 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 DPH3Q96FX2 82 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 ST8SIA5O15466 376 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 OR4E1P0C645 316 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 CSF2RAP15509 400 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ARRB2P32121 409 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ZXDAP98168 799 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ASAH1Q13510 395 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF583Q96ND8 569 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 CORINQ9Y5Q5 1042 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 MFNGO00587 321 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 LIMS3P0CW19 117 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 LIMS4P0CW20 117 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 C5orf17Q8NAS9 161 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 BCL7CQ8WUZ0 217 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF764Q96H86 408 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 NMUP48645 174 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 TIAL1Q01085 375 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 CST9Q5W186 159 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 TRILQ7L0X0 811 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 KCND3Q9UK17 655 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ADRA1AP35348 466 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 MEOX2P50222 304 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 AGBL5Q8NDL9 886 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 WDR89Q96FK6 387 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 SEBOXQ9HB31 216 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 LYG2Q86SG7 212 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 CCDC190Q86UF4 302 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 SLC39A11Q8N1S5 342 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ADAT3Q96EY9 351 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 USP22Q9UPT9 525 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 DHRS7CA6NNS2 312 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 PRKRAO75569 313 aaKnown RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 SPINK9Q5DT21 86 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 TRAT1Q6PIZ9 186 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ZDHHC23Q8IYP9 409 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 SNX22Q96L94 193 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 FER1L6-AS2Q96M78 137 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ZDHHC5Q9C0B5 715 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM191AQ9H0A3 160 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF385DQ9H6B1 395 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 IL10RAQ13651 578 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM241Q24JQ0 296 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ETFBKMTQ8IXQ9 262 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 ACOT8O14734 319 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 NID1P14543 1247 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 CD38P28907 300 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 DHODHQ02127 395 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 MRPS2Q9Y399 296 aaKnown RBP12.17□□□□□ -0.46
TRIM56-201ENST00000306085 TRGV10A0A0A0MS01 117 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 XKR7Q5GH72 579 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 SLC35D3Q5M8T2 416 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 LHX3Q9UBR4 397 aa12.17□□□□□ -0.46
TRIM56-201ENST00000306085 M0QZK8 103 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 GGCTO75223 188 aaKnown RBP12.16□□□□□ -0.46
TRIM56-201ENST00000306085 GPANK1O95872 356 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 ARR3P36575 388 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 KRASP01116 189 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 HAAOP46952 286 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 CALHM3Q86XJ0 350 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 DUSP18Q8NEJ0 188 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 OR52N4Q8NGI2 321 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 C2orf50Q96LR7 162 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 MED19A0JLT2 244 aaPredicted RBP12.16□□□□□ -0.46
TRIM56-201ENST00000306085 SLC16A13Q7RTY0 426 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 NUDCD2Q8WVJ2 157 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 FAM117AQ9C073 453 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 TOMM34Q15785 309 aaPredicted RBP12.16□□□□□ -0.46
TRIM56-201ENST00000306085 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms