RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
RAB40A-201ENST00000304236 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
RAB40A-201ENST00000304236 TRAV14DV4A0A0A6YYC5 116 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 A0A1B0GW55 424 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 OR5H14A6NHG9 310 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF814B7Z6K7 855 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 C1QL1O75973 258 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 STK17BO94768 372 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 NMBP08949 121 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 DUX4L2P0CJ85 424 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 DUX4L3P0CJ86 424 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 DUX4L4P0CJ87 422 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 DUX4L5P0CJ88 424 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 DUX4L6P0CJ89 424 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 DUX4L7P0CJ90 424 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF250P15622 560 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 MGMTP16455 207 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 MPGP29372 298 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 TAS2R31P59538 309 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 RPS27AP62979 156 aaKnown RBP12.5□□□□□ -0.41
RAB40A-201ENST00000304236 UBA52P62987 128 aaKnown RBP12.5□□□□□ -0.41
RAB40A-201ENST00000304236 TRA2AQ13595 282 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAB40A-201ENST00000304236 HYAL4Q2M3T9 481 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF546Q86UE3 836 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 CCDC54Q8NEL0 328 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 NUDCD2Q8WVJ2 157 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 NAA11Q9BSU3 229 aaPredicted RBP12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF700Q9H0M5 742 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 LPAR5Q9H1C0 372 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 DUX4Q9UBX2 424 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ANAPC10Q9UM13 185 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 IGHV1-45A0A0A0MS14 117 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ZSCAN5BA6NJL1 495 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 RER1O15258 196 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 CSN2P05814 226 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 JMJD7P0C870 316 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ABOP16442 354 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 GNB3P16520 340 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 NAT1P18440 290 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 CD96P40200 585 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 CSNK1A1P48729 337 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF133P52736 654 aaPredicted RBP12.5□□□□□ -0.41
RAB40A-201ENST00000304236 CLDN17P56750 224 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 C10orf128Q5T292 105 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 COQ8AQ8NI60 647 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 MITD1Q8WV92 249 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 PHB2Q99623 299 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 URM1Q9BTM9 101 aaKnown RBP12.5□□□□□ -0.41
RAB40A-201ENST00000304236 ANGPTL4Q9BY76 406 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 NARFLQ9H6Q4 476 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 SDHAF2Q9NX18 166 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 GHRLQ9UBU3 117 aa12.5□□□□□ -0.41
RAB40A-201ENST00000304236 C9orf170A2RU37 121 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 MFSD2BA6NFX1 497 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 C9J4A7 227 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 OR2F2O95006 317 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 HCKP08631 526 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 MSR1P21757 451 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 CBX5P45973 191 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 H3F3AP84243 136 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 CLN3Q13286 438 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 OR2F1Q13607 317 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF345Q14585 488 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 PRAMEF20Q5VT98 475 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF660Q6AZW8 331 aaPredicted RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 PCSK4Q6UW60 755 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 ALKAL2Q6UX46 152 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 FOXL2NBQ6ZUU3 175 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 FAM57BQ71RH2 274 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 GJC3Q8NFK1 279 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 OR56B1Q8NGI3 324 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 OR5M9Q8NGP3 310 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 OR14K1Q8NGZ2 314 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 TMEM54Q969K7 222 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 FAM71F1Q96KD3 344 aaPredicted RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 IMMP1LQ96LU5 166 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 PDCD10Q9BUL8 212 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 REG4Q9BYZ8 158 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 KCNK7Q9Y2U2 307 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 K7ENP7 123 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 SSX5O60225 188 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 CDC14BO60729 498 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 RAMP1O60894 148 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 MPIG6BO95866 241 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 APOC1P02654 83 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 PRF1P14222 555 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 POU3F2P20265 443 aaPredicted RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 ZP3P21754 424 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 HRH1P35367 487 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 IL13RA1P78552 427 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 ZFP36L1Q07352 338 aaKnown RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 SGCAQ16586 387 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 INO80CQ6PI98 192 aaPredicted RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 PDZD9Q8IXQ8 264 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 KCNRGQ8N5I3 272 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 PNLDC1Q8NA58 520 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms